Ahniella affigens: C7S18_05125
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Entry
C7S18_05125 CDS
T05483
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
xba
Ahniella affigens
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xba03032
]
C7S18_05125
03036 Chromosome and associated proteins [BR:
xba03036
]
C7S18_05125
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_05125
DNA replication proteins [BR:
xba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C7S18_05125
Chromosome and associated proteins [BR:
xba03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C7S18_05125
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C7S18_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CATASP
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AVQ00005
UniProt:
A0A2P1PYV6
LinkDB
All DBs
Position
1377437..1377793
Genome browser
AA seq
118 aa
AA seq
DB search
MTKSELIEALSRRQTHLAFHDVEFAVKEILEQIANALAAGDRVEIRGFGSFSLHFRPPRM
GRNPKTGDSVSLPGKYVPYFKPGKELRDRVNESAAPITAESSVDDGDDGDDGDDDSIS
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaattgatcgaagccctgtcccggcgccagacccaccttgcctttcac
gacgtagagtttgccgtcaaggaaatccttgagcagattgccaatgcgttggccgctggc
gatcgcgttgagatccgcggttttggcagtttctcgctgcacttccgtccgccgcgcatg
gggcgcaaccccaagaccggtgactcggtgtcgctgccgggcaaatacgtgccttacttc
aagcccggcaaagaactgcgcgaccgcgtgaacgagagcgccgcgcccattactgctgag
tcctcagtagatgatggcgacgacggcgatgacggcgacgacgactcgatcagctga
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