Ahniella affigens: C7S18_05990
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Entry
C7S18_05990 CDS
T05483
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xba
Ahniella affigens
Pathway
xba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S18_05990 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xba03019
]
C7S18_05990 (pnp)
03016 Transfer RNA biogenesis [BR:
xba03016
]
C7S18_05990 (pnp)
Enzymes [BR:
xba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C7S18_05990 (pnp)
Messenger RNA biogenesis [BR:
xba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C7S18_05990 (pnp)
Transfer RNA biogenesis [BR:
xba03016
]
Prokaryotic type
tRNA degradation factors
C7S18_05990 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AVP96776
UniProt:
A0A2P1PPK8
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All DBs
Position
1578703..1580793
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AA seq
696 aa
AA seq
DB search
MAKHIKKFQFGNHEVVLETGEIARQATAAVVVKMLDSVVLVTVVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRPTERETLISRLIDRPIRPLFPEEMRNEIQIIATVLSAN
PEHECDIPAMIGASAALSLTGLPFNGPIGSAKVGFIDGKYVLNPTITQLKDSKLELVVAG
TSNAVLMVESEAKLLSEDVMLGAVVFGHQAQQSVINAIKEFAAEVGPKTFDWSAPAKNVA
LIDAIKAAVGDRLGTAYQIRDKGERRTAINALRAEVQGSLAAQKEANGWKDGEVNKEFAE
LEYSTMREMVLSTKSRIDGRDLTTVRPITVQVGVLPRTHGSALFTRGETQALVITTLGTT
RDAQIIDALEGETKESFMFHYNFPPFSVGETGRVGAPKRREVGHGRLAKRGVQAVTPSME
EFPYVLRVVSEITESNGSSSMASVCGSSLALMDAGVPLKSPVAGIAMGLIKEGDRYAVLS
DILGDEDHLGDMDFKVAGSAEGISALQMDIKIDGITEEIMRVALNQARGGRLHILGEMNK
SLSESRKELSDFAPRLLTMKIHPDKIREVIGKGGATIQSITKETGTTIDIQDDGTIIIAS
VNAAAAQAAKARIESITSDVEPGRIYEGKVAKLMDFGAFVTIAPGKDGLVHVSQIANERV
EKVSDKLKEGDIVKVKVLEVDKQGRIRLSMKAVDEG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcacatcaagaaatttcagttcgggaatcacgaagttgtgcttgagacgggc
gaaatcgcccgtcaagccacggctgcagtggtcgtcaaaatgctggactcggtcgtgctc
gtcacggtcgtggccgcgaagtcggcgcgggaaggtcaagacttcttcccgctgacggtc
gactaccaagaaaagttctacgccggcggccgcatccccggcggtttcttcaagcgcgaa
ggtcgcccgaccgagcgtgagaccttgatctcgcgcctgatcgaccgcccgatccgcccg
ctgtttcccgaagaaatgcggaacgaaatccagatcatcgccaccgtgctgtcggcgaat
ccggaacacgaatgcgatatcccagcgatgatcggcgcgtccgccgcgctgagcctcacc
ggtctgccgttcaacggcccgatcggttcggccaaagtcggcttcatcgacggcaagtat
gtgctgaaccccacgatcacgcagctcaaagactctaagctggaactcgtggtggccggt
acgtcgaacgctgtgctgatggtcgaatccgaagccaagctgctgtcggaagacgtgatg
cttggcgccgtggtgtttggtcaccaggcccagcaatcagtcatcaacgcgatcaaggaa
ttcgcggccgaagtcggcccgaagacgtttgattggtcggctccggccaagaacgtcgcg
ctgatcgatgccatcaaggcagcggttggtgatcgtctcggcaccgcctatcagatccgt
gacaagggcgaacgccgcactgcgatcaatgcgctgcgcgccgaagtccagggcagcctc
gccgcccagaaggaagcgaacggctggaaggacggcgaagtcaacaaggaattcgccgaa
ctcgaatacagcacgatgcgcgagatggtgctcagcaccaagtcccgtatcgacggccgc
gacctgaccacggttcgcccgatcacggtgcaggttggcgttctgccacgcacccatggt
tcggcactgttcacccgtggcgaaacccaggctctggtcatcacgacccttggcaccact
cgcgacgcgcagatcatcgacgcgctcgaaggcgagaccaaagaatcgttcatgttccac
tacaacttcccaccgttctcggttggtgaaaccggtcgcgtcggcgcgccgaagcgtcgc
gaagtcggccacggccgcctcgccaagcgcggtgtgcaggctgtcacgccgagcatggaa
gagttcccgtacgtgctccgcgtcgtctccgagatcactgagtcgaacggctcgtcctcg
atggcttccgtctgcggctcctcgctcgcactgatggacgccggcgtgccgctgaagtct
ccagtggccggtatcgcgatgggtctgatcaaagaaggcgatcgctacgccgtgctgagc
gacatcctcggcgacgaagatcacctcggcgacatggacttcaaggtggccggtagtgcc
gaaggcatttccgcgctgcagatggacatcaagatcgacggcatcaccgaagaaatcatg
cgcgtagccctgaaccaggctcgcggtggtcgtctgcacatcctcggtgaaatgaacaag
tccctgagcgaatcgcgcaaagaactgtccgatttcgccccgcgcctgctgaccatgaag
atccatccggacaagatccgcgaagtgatcggcaagggcggcgccacgatccagtccatc
accaaagaaaccggcacgacgatcgacatccaggacgacggcacgatcatcatcgcgtcg
gtcaacgccgccgctgcgcaagccgccaaggcgcgcatcgagtcgatcacgtccgacgtt
gagccaggccgcatctacgaaggcaaggttgccaagctgatggacttcggcgcattcgtg
accatcgccccaggcaaagacggcctcgtgcatgtgtcgcagatcgccaacgagcgcgtc
gagaaggtctccgacaagctcaaggaaggcgacatcgtcaaggtcaaggttctggaagtc
gacaagcaaggccgcatccgcctaagcatgaaggccgtcgacgaaggatga
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