Ahniella affigens: C7S18_07700
Help
Entry
C7S18_07700 CDS
T05483
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xba
Ahniella affigens
Pathway
xba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S18_07700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xba03019
]
C7S18_07700
03009 Ribosome biogenesis [BR:
xba03009
]
C7S18_07700
Enzymes [BR:
xba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7S18_07700
Messenger RNA biogenesis [BR:
xba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7S18_07700
Ribosome biogenesis [BR:
xba03009
]
Prokaryotic type
rRNA helicases
C7S18_07700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
Cas3-like_C_2
AAA_22
Lamprin
Motif
Other DBs
NCBI-ProteinID:
AVQ00045
UniProt:
A0A2P1PYZ5
LinkDB
All DBs
Position
1962804..1964828
Genome browser
AA seq
674 aa
AA seq
DB search
MPKSEAPAAESLRFDQLNLPKSLLDALTAVGYETPSPIQAATIPPLLEGRDVLGQAQTGT
GKTAAFALPVLARISPDQRLPQALVLCPTRELAIQVAEAFQKYASKLEDFHVLPIYGGQG
YGQQLQGLRRGVDVVVGTPGRVIDHLERGTLDLSKLKTLVLDEADEMLRMGFIDDVRAIL
DKTPPERQIALFSATMPAPIKKIADTYLKNPVEVAIASKTRTATTVKQRYWLGSPAQKLE
ALTRILEVEPFEGMIVFARTKQATEELAEKLAARGFSAQAINGDIPQALREKTIAKLKDG
SLDILVATDVAARGLDVDRISHVVNFDVPYDVESYVHRIGRTGRAGRSGDAILFVSPRER
GMLRTIERVTRQIIEPMDLPTVDAINQSRVSKFKSRITEALAQGGLAVFLELIEEFEREH
GTSTIEIAAALARMVQGETPLLVSPDSKREPFQKFRQNDSRDERPFTKRADRDERPTRRR
HQDAEPLPPRQHAISAEAPSRDESAPTKRPRIERFDDEAPSARGSERPAPRERRERRKED
GFETFRIAVGRVNGAMPRNIIGAIANEAGLESGHIGRLEIFDDYSLIDLPEGMPTDLFQH
LKKVWVSGKTLDIRRWEDSPPPFRGKPEKFAGDDRPRRDKPVGKPSAGKGGPGKPGLGKP
GLGKAGLGKPKRKY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtccgaagctcctgccgcagagtcgctgcggttcgatcaattaaatctcccg
aagagtctgctcgacgcgctaactgccgttggctacgagacgccgtcgccgattcaggcc
gcgacgattccgccactgctggaaggtcgcgacgtgcttggccaggcgcaaacgggtacc
ggcaaaacggctgccttcgcactgccggttctggcgcgcatcagcccggaccagcggctg
ccgcaggctttggtgttgtgtccgacgcgcgaattggccatccaggtcgccgaagcgttc
cagaaatacgcctccaagttggaagattttcatgtgctgccgatttatggcggacagggc
tatggtcagcaattgcagggcttgcgtcgcggcgttgatgtggtggtgggcacaccaggc
cgcgtgatcgatcatctggagcgcggcacactggacttgtccaaactgaagacgctcgtg
ctggacgaagcggacgaaatgctgcgcatgggcttcatcgatgatgtccgcgccattctc
gacaagacgccgcccgagcgccagatcgcgctgttctcggcgaccatgccggcgccgatc
aagaagattgccgacacgtatttgaagaacccggttgaagtcgccatcgcgtcgaagacg
cgcacggccacaacggtcaagcagcgttactggctcggttcgcccgcgcaaaagctcgag
gcgctgacgcgcattttagaagtcgaaccgttcgaaggcatgatcgtgttcgcccgcacc
aagcaggcaaccgaagaacttgccgagaagctggccgcgcgtggattttcggcgcaggcg
atcaacggcgatatcccgcaggcgctgcgggaaaagacgattgccaaactgaaagacggc
tcgctcgacattctggtggccactgatgtggccgcacgcggtctggacgtcgatcgcatc
agccacgtggtcaacttcgatgtgccgtatgacgtggaaagctacgtgcatcggattggc
cggaccggccgcgcgggccgcagtggcgacgcaatcctgttcgtatcgccacgcgagcgc
ggcatgctgcgcacgatcgagcgcgtcacgcgccagatcatcgagccaatggatctgccg
acagtcgatgcgatcaaccaaagtcgcgtcagcaagttcaagagccggatcaccgaggcg
ctggctcagggcggtcttgcggtgttcctggagctgatcgaggagttcgagcgggagcac
ggcaccagcaccattgaaattgcggccgcgctcgcacgcatggtgcaaggtgagacccca
ctgctggtgtcgccggattcgaagcgcgaaccgttccagaagttccgccagaacgacagc
cgcgacgagcgtccgttcaccaagcgcgccgatcgcgacgagcggccgacccgccgtcgg
caccaagatgccgaaccgttgccgccgcgccagcacgccatcagcgcggaagcgccgagt
cgcgatgagtccgcgccgactaagcgcccccggatcgagcgttttgacgacgaggcgcct
agtgcccgcggcagcgagcgtccggcaccgcgcgaacgccgtgagcgtcgcaaggaagat
gggttcgaaacgttccgaattgcggtcggccgcgtcaacggcgccatgccgcgcaatatc
atcggtgcaatcgccaatgaggcgggcctggaatccggtcatatcggacggctcgaaatc
tttgacgactacagcctgatcgacctgccggaaggcatgccgaccgacctgttccagcac
ctgaagaaggtgtgggtgtcgggcaagacgttggatattcgccgttgggaagatagtcca
ccgccgttccgcgggaaaccagaaaagtttgccggtgacgatcgtccgcgtcgggacaag
cctgtgggcaaaccaagtgccggcaagggtggtccaggcaaaccgggcctaggcaaaccg
ggtcttggcaaagcaggtttgggcaaaccaaagcggaagtactga
DBGET
integrated database retrieval system
