Ahniella affigens: C7S18_09540
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Entry
C7S18_09540 CDS
T05483
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xba
Ahniella affigens
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xba03016
]
C7S18_09540
Enzymes [BR:
xba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C7S18_09540
Transfer RNA biogenesis [BR:
xba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C7S18_09540
Prokaryotic type
C7S18_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AVP97422
UniProt:
A0A2P1PRH3
LinkDB
All DBs
Position
complement(2487112..2488119)
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AA seq
335 aa
AA seq
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MSELPFAYGGAPLRGRLRVEPEDFFVDEQLGFEASGSGEHWLVHIEKRGANTVFVAKQLA
SFAGVSERDVGYAGMKDRHAVTRQFFSVLAKKGRDTDWTQCAIEGVTVLSAQRHARKIQR
GALRGNAFVIRLRDVSGDRELAAQRMAAIAAHGVPNYFGEQRFGHGGGNVDKALAMFAGK
RVERAERSILLSAARSEIFNAVLAARVADGSWQRALDGDVFQLDGRNAIFGPEPLSDELH
ERIVRGDIHPTGPMFGRGELRTTNAVCALETAIFDAHSELCAGLITAGLDHERRSLRLPA
RDFTCEWNNTDLIARFSLPAGAYATTVLRELVRWD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttgccattcgcctacggcggcgcgccgctgcgcggtcgcttgcgtgttgag
cccgaggacttttttgtcgacgagcagctcggctttgaggcgagcggcagtggcgagcac
tggctcgtgcatatcgagaagcgtggcgcgaataccgtgttcgttgcgaagcaactcgca
agcttcgcgggtgttagcgagcgcgacgtcggttatgccggtatgaaggaccggcatgct
gttacccgccagtttttctcggtgttggcgaagaagggccgggacaccgattggacgcag
tgtgcgatcgaaggtgtgacggtgctttctgcgcaacggcatgcccgcaagattcagcgc
ggtgcattgcgcggcaatgccttcgtgatccgcctgcgtgatgtcagtggcgaccgcgag
ctcgcggcgcagcgcatggctgcgatcgccgcgcacggcgtgcccaactacttcggcgaa
caacgcttcggacacggtggcggcaacgtcgacaaggccctggcaatgttcgccggcaaa
cgtgtcgaacgcgctgagcgctcgatcctgctcagcgccgcgcgttccgaaatcttcaat
gccgtgctcgctgcacgggttgccgatggcagttggcagcgtgcgctggatggcgacgtg
ttccaacttgacggccgcaatgcgatcttcgggcccgaaccgttgagcgacgaactgcat
gaacgcatcgtacgcggcgacatccatccgaccgggccgatgttcggccgcggtgaactc
cgcacgaccaatgcggtgtgtgcgcttgaaactgccatcttcgacgcccattccgaactt
tgcgccggcctcatcaccgccggcctcgaccatgaacggcggtccctacgcctgccggcg
cgcgacttcacgtgcgaatggaataacaccgacctgatcgcacgtttttcgcttccagcg
ggtgcttacgcgacgacggtgcttcgggaattggtgcgctgggactga
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