Ahniella affigens: C7S18_11820
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Entry
C7S18_11820 CDS
T05483
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xba
Ahniella affigens
Pathway
xba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7S18_11820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xba03000
]
C7S18_11820
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_11820
Enzymes [BR:
xba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C7S18_11820
Transcription factors [BR:
xba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C7S18_11820
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7S18_11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AVP97840
UniProt:
A0A2P1PSM8
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All DBs
Position
complement(3089003..3090412)
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AA seq
469 aa
AA seq
DB search
MSTWTDAELSVFEDARKSRDRRFDGMFFIAVRSTRIYCRPICPAPAPLVRNITYFRTAGE
AQAAGYRPCLRCRPEIAPEDHRLRLVDDLIEQAWLAIQEGALDRQSPTAFAKVYGLSERQ
LRRQFLARWQITPAEAAATRRLHLAKQLLTETDRPVTEIALAAGYRSIRGFNGALQSSLG
MNPLRLRKQLSGDRRPGVCLRLPYRPPYDWAQILEFLRLRALPAVESVQDDAYHRVLKID
GAFAHLSVRHLPKHACLELQVDGLPTALVPKLARRVRLAFDLDADPLAIAAVLERDPRLR
ELVKNRPGLRLPVGLDAFETGVRAILGQQISVAATRTLLNRLLVGEGAHLAIPDPASLAA
RAPETFGIPLKRAEAVRAFAAAVANGQLSLSPIQTLAQFTAQAVALPGIGPWTANYMAMR
AIGAPDAFVVDDLIIKRRLGVDKAAALLQRVERWRPWRAYGVLYCWSES
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctggaccgatgccgaactgagcgtgttcgaagatgcccgcaagagccgtgat
cggcgcttcgacgggatgttcttcatcgccgtccgcagcacccgaatttattgtcggccg
atctgcccggcgccggcgcccctcgtgcggaacatcacctatttccgaaccgctggtgag
gcgcaggcggctggctatcggccctgtctgcgctgtcgccccgagatcgcacccgaagat
caccggcttcgtctcgtcgacgatctcattgaacaggcctggctggccattcaggaaggt
gcattggatcgacaatcgccgacagcgtttgccaaggtctatggattgtccgaacggcag
ctgcggcgacaatttcttgcccgctggcagataacgcctgcagaggccgctgccacgagg
cgtttgcatctcgccaagcaactgctgacggagactgatcggccggttaccgagattgcg
ctcgcggcgggctatcgcagtatccgcgggttcaacggagcattgcagtcgtcgcttggc
atgaatccgctgcggctccggaagcagctgtcaggtgaccgacgaccaggcgtttgcttg
cggctgccgtatcggccgccctacgactgggcgcagatactcgagtttctgcgtctgcgc
gcactacctgcggtcgaatcggtgcaggatgacgcctatcatcgggtcttgaaaatcgat
ggcgctttcgcgcacctgagtgtgcgccatctgccgaagcacgcctgtttggaactgcaa
gtggacggattgccaaccgcattggtgcccaagctggcgcgacgcgtccgcctagcgttc
gatctcgatgctgatccgctggccatcgcggcggtgctcgaacgcgacccgcgcctgcgt
gagctcgtgaagaaccggcctggcttgcgcttgccggtgggattggacgctttcgagacg
ggcgtccgcgcgatcctggggcaacagatcagcgttgctgcgacacgaacgttgctgaat
cgactgctcgttggggaaggcgcccacttggcgattcccgacccggccagtttggctgcg
cgagcgccggaaacgtttggcattcccttgaagcgcgcagaagcggtacgggcgttcgcc
gccgccgtggcgaacgggcaattgtcgctctcaccaattcagaccctggcacagtttacg
gcgcaagccgtggccctgcctggcatcggcccttggaccgcgaactacatggccatgcgg
gcgatcggcgcgcccgatgcatttgtggtcgatgatctgatcatcaagcgtcgcctcggt
gtcgacaaagcggcagcactgttacagcgggtagaacgctggcggccctggcgtgcttat
ggggtgctttattgctggagcgaatcatga
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