Ahniella affigens: C7S18_12780
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Entry
C7S18_12780 CDS
T05483
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xba
Ahniella affigens
Pathway
xba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7S18_12780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_12780
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7S18_12780
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7S18_12780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Viral_helicase1
Cytokin_check_N
Motif
Other DBs
NCBI-ProteinID:
AVQ00097
UniProt:
A0A2P1PZ45
LinkDB
All DBs
Position
complement(3310322..3312361)
Genome browser
AA seq
679 aa
AA seq
DB search
MTNTQPFQLVSDYQPAGDQPEAIRRLIEGFDAGLSHQTLLGVTGSGKTFAIANVVQAVQC
PTIVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINEH
IEQMRLSATKALLERRDALIVATVSAIYGLGDPNEYFKMVLHLTRGDRIDQRELLRRLTE
LQYTRNEFELKRGTYRVRGETVDVFPAESDNEAIRIELFDGEIESIAVFDPLLGQIRRKL
PRFTIFPKSHYVTTRRTTLEAINTIKSELMERLEQLYAQNKLVEAQRLKQRTQFDLEMLS
EIGYCQGVENYSRHLTGRMAGESPPTLFDYLPSDALLVVDESHVTIPQIGGMYRGDRSRK
ETLVEYGFRLPSALDNRPLKFEEFELRAPRAIYVSATPSAYELERSAGQVIEQVVRPTGL
VDPMVEVRPVRTQVDDLLSEIRIRVADGDRVLVTTLTKKMAENLTEYLNDAGVKVRYLHS
DIDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQT
IGRAARNVRGKAILYAETITRSMRAAMDETERRRNKQLAHNEAHGIVPKSVRKKIVDILE
GARDRGEAEATASPVRQVKMKKAAEDAIDYRLLTPSQLSAALKKLETKMYQHAQNLEFEQ
AAAVRDEMTRVKELGFKSE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacacgcaaccgttccaactggtcagtgactatcagcctgctggcgaccagccc
gaagcgattcggcggttgatcgaaggtttcgacgccgggctctcgcatcagacgcttctg
ggtgtgacgggttcgggcaagacgttcgcgatcgccaacgtcgtgcaggcggtgcagtgc
ccgacgatcgtcatggcgcccaacaagacgctggcagcgcaactctatggcgagttcaag
tcattctttccgaacaatgcagtcgagtacttcgtgtcgtactacgactactatcagcca
gaggcgtatgtgccgtcgtccgacacgtatatcgagaaggatgcatccatcaacgagcac
atcgagcagatgcgcctctcggccaccaaggcattgctggagcggcgcgatgcgctgatc
gtggccacggtgtcggcgatttatggcctcggagacccgaacgaatatttcaagatggtg
ctgcacctgacccgcggcgatcggattgatcagcgcgaattgctgcggcggctcaccgag
cttcagtacacacggaatgagttcgagttgaagcgcggtacctaccgggttcgtggtgaa
acggtcgatgtgtttccggcggagtcagacaacgaggcgatccggatcgagctgttcgat
ggtgagatcgagagtattgccgtgttcgatccgcttctgggccagatccggcgcaaattg
ccacgcttcacgatctttccgaagtcgcactacgtgaccacgcggcgcacgacgttggag
gcaatcaacaccatcaagtcagaattgatggagcgcttggagcagctctacgctcaaaac
aagctggtggaggcgcagcgcctgaagcagcgcacgcagtttgacctggagatgctgagt
gaaatcggctactgccagggcgtggagaactattcacgccatttgaccgggcgcatggcg
ggtgagtcgccgccaacgttgtttgactacctgccgtctgatgcgctgcttgtcgtcgac
gagtcgcatgtgaccatcccgcagattggtggcatgtatcgcggcgatcggtcacgcaag
gaaacgttggtggagtatggctttcgattgccctcggcgctggacaatcgaccgctgaag
tttgaagagttcgaactccgggcaccgcgcgccatctacgtatcagccacgccaagcgcc
tatgaactggagcgttcggccgggcaggtgattgagcaagtggtgcgcccgactggtctc
gtggatccaatggtcgaggtgcggcccgtgcggacccaggtcgacgatctgttgtccgaa
atccgcattcgggtggccgatggcgatcgcgtgctggtgacgacgctgaccaagaagatg
gccgagaatttgaccgagtacctgaacgacgccggagtcaaagtccgatatctgcattcc
gatatcgatacggtggaacgcgtggagatcattcgcgacctgcgcttgggggtgttcgat
gtgctggtggggatcaacctgctgcgcgaaggtctggacatgccggaagtgtcgctcgtc
gccattctcgatgccgacaaggaagggttcctccgttcaaccggctcgttgatccagacg
attggccgcgccgcccgaaacgttcgcggcaaggcgattctttacgccgaaacgatcacc
cgctcgatgcgagcggcgatggacgaaacggagcggcgtcgcaacaagcagttggcccac
aacgaggcgcacggcattgtgccgaagagcgtccggaagaagattgtcgacatcctcgaa
ggggcgcgtgatcgcggcgaggcggaagccacggcaagccctgtgcgtcaggtcaagatg
aagaaggctgcagaggacgcgattgactatcgactgctgacgccgtcgcaattgtcggcg
gcactgaagaagctcgaaaccaagatgtaccagcatgcgcagaatctcgaattcgagcag
gccgcagccgtgcgcgacgagatgacgcgcgtcaaggaactgggcttcaagtcggagtag
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