Ahniella affigens: C7S18_15975
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Entry
C7S18_15975 CDS
T05483
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xba
Ahniella affigens
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xba03009
]
C7S18_15975
Enzymes [BR:
xba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C7S18_15975
Ribosome biogenesis [BR:
xba03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C7S18_15975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Methyltr_RsmB-F
RrnaAD
Methyltransf_11
Cons_hypoth95
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
UPF0020
Methyltransf_32
Methyltransf_23
PrmA
YfeC-like
CMAS
Motif
Other DBs
NCBI-ProteinID:
AVP98594
UniProt:
A0A2P1PUS9
LinkDB
All DBs
Position
complement(4153427..4154752)
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AA seq
441 aa
AA seq
DB search
MRQRRPSPQFAEPIELEIHDLSHEGRGVGKHQGKTVFVTGALPGETVRAKRTEAYRQYDE
AHLLEVLVASPKRITPKCAHFGQCAGCVLQHLPAEDQIQAKERTLRENFARIGHVEPETW
LPALTGNPFQYRRRGRFSVRHVGKKGRALVGFRELNGKFVADIQECHVVAPRIGAQLPKL
AELVSTMDAADSIPQIEFANADQIAAFVFRHLNPLSEGDVQKLKDYARREGVAVFLQPKG
IDSVYALEPTDVQLYFDVPEFSLRYQFQPLDFIQVNGDINARMIRHALDLLDPQPTDHIL
DLFCGLGNFTLPLARKAAHVVGVEGDGPLVQRARDNARSNGLDNTEFAVADLIQEHRDAP
WARQQYDKILLDPARAGADGVIKWFPTKKVQRIVYVSCHPGSLARDAGMLVRDHGFKLSK
AGVMDMFPQTAHVESIAVFER
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcaacgtcgaccatccccgcagtttgccgagcccatcgaactcgagattcatgac
ctctcgcatgaggggcggggcgtgggcaagcaccaaggcaagacggtatttgtgaccggc
gcattgccgggcgaaacggtgcgggcgaagcggacggaggcgtatcggcagtacgacgag
gcccatctgctcgaagtgctggtcgcttcgcccaagcgaattacgccgaagtgtgcgcac
tttgggcaatgcgcaggctgcgtgctgcagcatctgccggctgaggatcagatacaggcc
aaggagcgcacgctgcgcgagaactttgctcgcattgggcatgtcgagccagaaacctgg
ttgccggcattgaccgggaatccgttccagtatcgccgccgtggtcgtttctccgtgcgc
catgtcggcaagaaagggcgcgcgctcgttgggttccgcgagctcaatggcaagtttgtc
gctgacattcaggaatgccacgtcgtggcgccgaggattggtgcgcagctgcccaagctc
gctgagttggtcagtacgatggatgctgccgatagcattccacagattgaatttgcgaac
gccgatcagatcgccgccttcgtgttccggcatctgaacccgttgagcgagggcgatgtg
caaaaactgaaggactacgcgcgccgcgaaggtgtggcggtgttcttgcaaccgaagggc
atcgactcagtttacgcgctcgagccgaccgacgtgcagctgtattttgacgtgcccgaa
ttttcgctccgctatcagttccagccactggacttcattcaggtcaatggcgatatcaat
gcgcgcatgattcgtcacgcgctcgatctgctggacccgcaacccaccgatcatatcctc
gacctgttctgcgggctcggcaacttcacgctgccactggcgcgcaaggccgcacacgtg
gtcggtgtcgagggcgatgggccgcttgtgcagcgggcccgcgacaacgcacgctcgaat
ggtctcgacaataccgagttcgcggtcgccgatttgattcaggaacatcgcgatgcacca
tgggcgcgtcagcagtacgacaagatattgctcgacccggcccgtgctggtgccgatggc
gtcatcaagtggttcccgaccaagaaggtgcagcgcattgtctacgtatcgtgccacccc
ggttcgctcgcccgcgatgccggcatgctcgtccgcgatcacggcttcaagctcagcaaa
gcgggggtcatggacatgtttccgcagacggcgcatgtcgagtcgatcgccgtgttcgag
cgttga
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