Ahniella affigens: C7S18_18970
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Entry
C7S18_18970 CDS
T05483
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xba
Ahniella affigens
Pathway
xba02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C7S18_18970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xba02022
]
C7S18_18970
02035 Bacterial motility proteins [BR:
xba02035
]
C7S18_18970
Two-component system [BR:
xba02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
C7S18_18970
Bacterial motility proteins [BR:
xba02035
]
Pilus system
Twitching motility proteins
C7S18_18970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
VpsR
AAA_16
AAA_5
HTH_50
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AVP99123
UniProt:
A0A2P1PWA1
LinkDB
All DBs
Position
complement(4921221..4922618)
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AA seq
465 aa
AA seq
DB search
MARQNALVIDDEPDIRELLVLTLTRMGLAVDTAGTVKEALERLAQHRYDLCFTDMRLPDG
SGQEIIEFVAKHQPSMPIAMITAHGNMDAAVTALKAGAFDFVTKPVDLSVLRRMVNSALK
LGEPKKPDAGRSPAATGVAQGPVASRLIGQSAAMQQLKATVAKVARSQAPVHIFGESGTG
KELVARLIHEQGPRAGGPFLAVNCGAIPTELMESEFFGHKKGSFTGAVSDKDGMFVAANG
GTLFLDEVADLPIHMQVKLLRVIQEKAVRPVGSTAEATIDVRILSATHKHLEHLVAEGRF
RQDLYYRINVIELRVPALRERGEDIPILANAYLARMAADWHLDRIDLDSSALDELSRYDF
PGNVRELENILERAVALCDEHTIRAADLGIGANRSDVAPPRLLEPVEDEGDPDGDPADLE
GYVASIERKAIIEALAATQNNKTKAAERLGISFRALRYKLKKLGV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacaaaacgcactggtgatcgacgacgagccagacattcgcgaacttctggtc
ctgaccctgacccggatgggcttggcggtcgacacggcgggcaccgtcaaagaggccctg
gaacgcctggcccagcatcgctacgacctgtgttttaccgacatgcgcctccccgatggc
agcggtcaggaaatcattgaattcgttgcgaaacatcagcccagcatgccgatcgccatg
atcaccgcgcacggcaacatggatgccgccgtcacggcgctgaaggccggcgcattcgat
tttgtaacaaaacctgtcgacttgagtgtcttgcggcgcatggtcaacagcgcgctcaag
cttggcgagccgaaaaaaccggacgccggtcgcagtcctgcggcgacaggcgttgcgcaa
ggtccggtggcaagtcgactcattggccagtctgcagcgatgcaacaactcaaggccacc
gtggccaaggtggcgcggagccaagcgcccgtccatatttttggcgagtcggggacaggc
aaggaattggtggcccggctgattcatgaacaaggcccgcgtgccggcggcccctttctg
gccgtcaactgcggcgccatcccaaccgaactgatggaaagtgagttcttcggccacaag
aaaggcagcttcaccggcgccgtcagcgacaaggacggtatgttcgtcgcggcgaacggc
ggtaccctgttcctggacgaggttgccgatttgcctattcatatgcaggtcaaactgctg
cgcgtgatccaggaaaaggcggtgcggccggttggatcgacggccgaggcgacgattgat
gtgcgcattctgagtgccacgcataaacatctggaacatctggttgccgagggccgattt
cgccaagacctttattaccgcatcaacgtgatcgagctccgggtgcctgcactccgcgaa
cgcggcgaagatatcccgatcctggccaacgcctacctggcgcggatggctgcagactgg
cacctcgatcggatcgatctcgacagcagcgcgctggacgaactcagccgctacgacttc
cctggcaatgttcgcgagctcgagaacattctggaacgggccgtggcgctgtgcgacgaa
catacgattcgcgccgccgatttgggaatcggggcgaaccgctccgatgtcgccccgccg
cggcttctggaaccggtcgaggacgaaggtgacccggacggcgacccggctgatctggaa
ggctacgttgccagcatcgagcgtaaggccataattgaggccttggcagcaacccagaac
aacaaaacgaaagcggctgagcggctgggaatctcgttccgagcgctgcgctacaagctc
aagaaacttggagtctga
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