Ahniella affigens: C7S18_21340
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Entry
C7S18_21340 CDS
T05483
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xba
Ahniella affigens
Pathway
xba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7S18_21340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_21340
Enzymes [BR:
xba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C7S18_21340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C7S18_21340
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7S18_21340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AVP99559
UniProt:
A0A2P1PXJ2
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All DBs
Position
5511833..5512645
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLKAQQIDALTLRRPDLRWPIPKALATAVRGQQILGVRRRAKYL
LIDTEPGAMLIHLGMSGSLRVLPHGQTAGKHDHYDLELSNHTLLRFNDPRRFGCLLWQAA
GTTHELLAHLGPEPLEGDFDGDYLFAMSRGRSAPIKAFLMDQAVVVGVGNIYVAEALFAA
GIRPMRAAGKVSRASYQAIAVAIRRILAYAIERGGTTLRDFLKPDGEPGYFEQELFVYGR
AGEPCKVCGGIIKGLVQSNRASSYCPRCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttacccgaagtcgaaaccacgcggcgcggcattgccccgcacctcaaagcg
cagcagatcgatgcgttgacgttgcgtcggccggacttgcgctggccgattccgaaagcg
cttgccaccgcagtgcgcggtcagcagatcctcggcgtccgccgacgcgcaaagtacttg
ctgatcgacaccgagccgggcgcgatgctgatccacctcggcatgtcgggcagcttgcgc
gtgctgccgcatggccagaccgccggcaagcatgatcactacgatctcgaactcagcaat
cacaccttgctgcgcttcaatgacccgaggcgtttcggctgcctgttgtggcaagcggct
gggaccactcatgagttgctcgcgcacctggggcccgaaccgctggagggcgatttcgat
ggcgactatctgttcgcaatgagccgcggccgcagcgcgccgatcaaggcattcctgatg
gaccaggccgtcgtcgtcggcgtcggcaacatctatgtggccgaggcgttgttcgccgcc
ggcattcgaccgatgcgcgctgccggcaaagtcagccgagcctcgtaccaggcgatcgcg
gttgccatccgacgcattctggcctacgcgattgaacgcggcggcaccacgcttcgggat
tttctgaagccggacggcgagccaggctattttgagcaggagttgttcgtttacggccgt
gctggcgagccttgcaaagtgtgtggcggcatcatcaagggtttggttcaatccaatcgt
gcgagcagttactgcccgcgttgtcaaaaatag
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