Ahniella affigens: C7S18_22870
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Entry
C7S18_22870 CDS
T05483
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xba
Ahniella affigens
Pathway
xba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7S18_22870 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_22870 (xth)
Enzymes [BR:
xba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C7S18_22870 (xth)
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C7S18_22870 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SpnB_Rossmann
Motif
Other DBs
NCBI-ProteinID:
AVP99843
UniProt:
A0A2P1PYD8
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All DBs
Position
5857893..5858654
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AA seq
253 aa
AA seq
DB search
MKIASWNVNSLKARMEHVQAWLESAKPDVLAMQEIKMESHLFPEQAFQALGYHCLANGQK
TYNGVAIIAKTPMQDVITQIPNFADEQRRVLAATIGDLRVIDLYVVNGQEVGSEKYQYKL
NWLEALQRWLEDEAARYPNLVVLGDFNIAPDDRDVHDPEAWHESVLCSTAERNAYKRLLD
LGLLDSYRELDDNGGVFSWWDYRQAAFRRNLGLRIDLVLISQALRGQLKAAGIDREPRKW
DKPSDHAPVWVEL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcctcctggaacgtgaactcgctgaaggcccgcatggaacacgtgcaggcc
tggttggaatcggccaaaccggacgtgctggccatgcaggaaatcaagatggaaagccat
ctgtttccggagcaggcctttcaggcgctcggctatcactgtctggcgaatggccagaaa
acctacaacggcgtggcgatcatcgcgaaaacgccgatgcaggatgtgatcacgcagatt
ccgaactttgccgacgagcaacgccgcgtgctggccgcgacgatcggcgatcttcgggtc
atcgatctgtatgtggtcaatggccaggaagtcggctccgaaaagtatcagtacaagctc
aactggctcgaagcgctgcagcgttggctggaagacgaagcagcgcggtatccgaatctg
gtggtgctcggcgacttcaacattgcacccgatgaccgcgacgtgcacgaccccgaggcc
tggcacgaatcggtgctgtgctccaccgctgagcggaatgcctacaagcgcttgctcgac
ctggggctattagacagctaccgcgaacttgatgacaacggtggcgtgttctcgtggtgg
gactatcgacaggcagcctttcgccgaaatctgggcctgcgcatcgacctggtgctgatc
agtcaggcgcttcgcgggcaactgaaagcggccggcatcgaccgcgaaccgcgcaaatgg
gacaaaccgagcgaccacgcgccggtatgggtcgagctatga
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