Pseudolysobacter antarcticus: ELE36_04065
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Entry
ELE36_04065 CDS
T06010
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xbc
Pseudolysobacter antarcticus
Pathway
xbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELE36_04065 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbc03019
]
ELE36_04065 (recQ)
03400 DNA repair and recombination proteins [BR:
xbc03400
]
ELE36_04065 (recQ)
Enzymes [BR:
xbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ELE36_04065 (recQ)
Messenger RNA biogenesis [BR:
xbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELE36_04065 (recQ)
DNA repair and recombination proteins [BR:
xbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ELE36_04065 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QBB69619
UniProt:
A0A411HGJ8
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All DBs
Position
complement(947301..949118)
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AA seq
605 aa
AA seq
DB search
MTTRARDTLRNIFGYPDFRGEQEAIVEHLASGGDSLVLMPTGGGKSLCYQIPALLRDGTA
IVISPLIALMQDQVDALAQLGVRAGLLNSSLDGQAAYAVEQQLRRGELDLLYVAPERLLT
SRFLALMDEAKIALFAIDEAHCVSQWGHDFRPEYRELNLLHERYPNVPRIALTATADEPT
RREIVERLGLEDARQFVASFDRPNIRYRVQQKDNGRRQLKDFLATHDGDAGIIYCLSRKK
VDETAAWLCDNDINALPYHAGMDATARATNQRRFLREDGVVMVATIAFGMGIDKPDVRFV
VHMDLPKSIEGYYQETGRAGRDGQPADAWMLYGLGDVVSLSQMIANGDASEERKRLERHK
LDALIGFCESVRCRRQSLLAAFGQLAADACGNCDNCLEPAETWDATLAVQKALSCVYRSG
QRFGVAHVVAILRGEENERVLQFGHQQLSTFGIGAELSEKEWRSIFRQMVANGLLEVDVQ
GFGSLRLSAASRAVLKGEQPVALRRDVEQKRERTRGKKGGKNSNAGSTLRSQDQALWEAL
RNLRAQLAREQNVPAYVIFHDVTLLAIAQQRPSNEDDLGQISGVGARKLERYGEQILTTL
NQFSA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgactacacgcgctcgcgatacgctccgcaacatctttggttatcctgattttcgcggc
gaacaagaagccatcgtcgagcatctggccagcggcggcgacagcctggtgctgatgccg
acgggcggtggcaaatccttgtgttaccagattccggcgctgttgcgcgatggcacggcg
atcgtgatttcgccgttgatcgcgctgatgcaggatcaggtcgatgcgctggcgcagctc
ggcgtgcgtgcgggtttgctgaactcctcgctggatggccaagccgcctacgcggtggag
cagcaactgcggcgcggcgagctcgacctgctgtatgtcgccccggaacgtttgctgacg
tcgcgttttctcgccctgatggacgaggcaaagattgcgttgttcgccatcgacgaggcg
cattgcgtatcgcaatggggccatgatttccgacccgaatatcgcgagctaaatttgctg
cacgaacgttatccgaacgtgccgcgcatcgcgctgaccgctaccgccgatgaaccgacg
cgacgcgaaatcgtcgagcgtctcgggctcgaagacgcgcgccagtttgttgcgagtttt
gatcgaccgaatatccgttatcgtgttcagcaaaaggacaatggtcgacgccagctcaag
gattttcttgcgacgcacgacggtgacgccggaatcatctattgcctgtcgcgcaagaag
gtcgacgaaaccgcggcgtggctttgcgataacgacatcaacgccctgccctatcacgcc
ggcatggatgcgacggcgcgcgcgacgaatcagcgccgttttttgcgcgaagatggcgtg
gtgatggtcgcaacgattgcgttcggcatgggcatcgacaaacccgatgtgcgttttgtg
gtgcatatggatttgccgaaaagtatcgagggttattatcaggaaaccggtcgcgcaggt
cgtgatggacagcccgccgatgcgtggatgttgtacggcctcggcgatgtggtttcgctg
agtcagatgatcgccaatggcgatgccagcgaggaacgcaagcggctggaacggcacaag
cttgatgcgctgatcggcttttgcgaatcggtgcgttgtcgacgtcagagcctgctcgcc
gcgttcggtcaacttgcggcggacgcatgcggcaattgcgacaactgcctcgaaccggcg
gaaacctgggatgcgacgcttgcagtgcaaaaggcgttgtcgtgcgtgtatcgcagcggc
caacgatttggcgtggcgcatgtggtcgcgattctgcgtggcgaagaaaacgaacgcgtg
ctgcaattcggtcatcagcaacttagtacgttcggcatcggcgccgagctcagcgaaaaa
gaatggcgcagcatcttccgccagatggtcgcgaacggtttactcgaagtcgatgtgcaa
ggtttcggcagcttgcgtttgagcgcggcgagtcgtgccgtgctgaagggcgagcagccg
gtcgcactgcgacgcgatgtcgaacagaagcgcgagcgaacccgcggcaaaaagggcgga
aagaacagcaacgcgggcagcacgctgcgcagccaggatcaggcgttatgggaagcgttg
cgcaacctgcgcgcgcaactcgcacgtgaacaaaacgtgccggcgtatgtgatattccac
gatgtgactttgctcgcgattgcgcagcagcgaccgagcaacgaagacgatctcggccag
atcagcggcgtcggggcgcgcaaactcgagcgttacggcgagcagattttgacgacactg
aaccagttttcggcgtaa
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