Pseudolysobacter antarcticus: ELE36_04935
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Entry
ELE36_04935 CDS
T06010
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xbc
Pseudolysobacter antarcticus
Pathway
xbc00521
Streptomycin biosynthesis
xbc00523
Polyketide sugar unit biosynthesis
xbc00525
Acarbose and validamycin biosynthesis
xbc00541
Biosynthesis of various nucleotide sugars
xbc01100
Metabolic pathways
xbc01110
Biosynthesis of secondary metabolites
xbc01250
Biosynthesis of nucleotide sugars
Module
xbc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ELE36_04935 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ELE36_04935 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ELE36_04935 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ELE36_04935 (rfbB)
00525 Acarbose and validamycin biosynthesis
ELE36_04935 (rfbB)
Enzymes [BR:
xbc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ELE36_04935 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QBB69772
UniProt:
A0A411HGZ2
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Position
1159537..1160592
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AA seq
351 aa
AA seq
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MKTLFVTGGAGFIGGNFVLDLLARGGYRIVNLDKLTYAGNPDTLSSVQAHADYRFVHGDI
GDAELVSRLLAEHQPDAVVNFAAESHVDRSIDGPAEFVQTNVVGTLSLLESTLKFWRTLD
EKRRAEFRFLHVSTDEVYGSLGAEGRFTETTAYAPNSPYSASKAASDHLVRAFHHTYGLP
TLTTNCSNNYGPFQFPEKLIPLMIQKALTAQPLPVYGDGLNVRDWLFVTDHCRAIQRALE
AGRVGEVYNVGGDAERENIHVVKTICTLLDERRPLADGKKREALITYVKDRPGHDRRYAI
DASKIKRELDWSQTETFESGIARTVDWYLANQTWCQRVLDGSYRGERLGGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcttttcgtgactggtggtgccggatttatcggcggcaattttgtgctcgat
ctgctcgcccgcggcgggtatcgcatcgtcaatctcgacaaactcacctacgccggcaac
ccggataccttgagcagcgtgcaggcgcacgccgactatcgatttgttcacggtgacatc
ggcgatgccgaactggtatcgcgtctattggccgagcatcaacccgatgcggtcgtgaat
ttcgccgccgaatcgcatgtcgatcgctcgatcgacgggccggcggaatttgtccagacc
aatgttgtcggcactttgagcctgctcgaatcgaccttgaaattctggcgcacgctcgac
gaaaagaggcgcgccgagtttcgtttcctgcatgtttccaccgacgaggtttacggctcg
cttggtgccgaaggacgcttcactgaaaccacggcgtacgcgccgaattcgccatactcg
gcgtcgaaggcggcctccgatcatttggtgcgcgcgttccatcacacctacggcctgccg
acgctgacgaccaattgctcgaacaattacgggccattccagtttccggaaaagctcatc
ccgctgatgatccagaaagcgctgaccgcgcaaccgctgccggtttacggcgacggcttg
aacgtgcgcgattggctgttcgtgaccgatcattgccgcgcgatccagcgcgcgctcgaa
gcagggcgggtcggcgaggtctacaacgtcggcggtgatgccgagcgcgaaaatatccat
gtcgtcaaaactatttgcacattgctcgacgagcgccgtccgctggccgatggcaaaaaa
cgcgaggcgctgatcacctacgtcaaggataggcccggccatgatcgacgttatgcgatc
gacgcgagcaagatcaagcgcgaactcgactggtcgcaaaccgagacctttgaatccggt
atcgcgcgcaccgtcgactggtatcttgccaatcagacatggtgtcagcgtgtgctcgac
ggcagctatcgcggcgagcgtctcggcggcgcgtaa
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