Pseudolysobacter antarcticus: ELE36_04935
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Entry
ELE36_04935 CDS
T06010
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xbc
Pseudolysobacter antarcticus
Pathway
xbc00521
Streptomycin biosynthesis
xbc00523
Polyketide sugar unit biosynthesis
xbc00525
Acarbose and validamycin biosynthesis
xbc00541
O-Antigen nucleotide sugar biosynthesis
xbc01100
Metabolic pathways
xbc01110
Biosynthesis of secondary metabolites
xbc01250
Biosynthesis of nucleotide sugars
Module
xbc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ELE36_04935 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ELE36_04935 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ELE36_04935 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ELE36_04935 (rfbB)
00525 Acarbose and validamycin biosynthesis
ELE36_04935 (rfbB)
Enzymes [BR:
xbc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ELE36_04935 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QBB69772
UniProt:
A0A411HGZ2
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Position
1159537..1160592
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AA seq
351 aa
AA seq
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MKTLFVTGGAGFIGGNFVLDLLARGGYRIVNLDKLTYAGNPDTLSSVQAHADYRFVHGDI
GDAELVSRLLAEHQPDAVVNFAAESHVDRSIDGPAEFVQTNVVGTLSLLESTLKFWRTLD
EKRRAEFRFLHVSTDEVYGSLGAEGRFTETTAYAPNSPYSASKAASDHLVRAFHHTYGLP
TLTTNCSNNYGPFQFPEKLIPLMIQKALTAQPLPVYGDGLNVRDWLFVTDHCRAIQRALE
AGRVGEVYNVGGDAERENIHVVKTICTLLDERRPLADGKKREALITYVKDRPGHDRRYAI
DASKIKRELDWSQTETFESGIARTVDWYLANQTWCQRVLDGSYRGERLGGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcttttcgtgactggtggtgccggatttatcggcggcaattttgtgctcgat
ctgctcgcccgcggcgggtatcgcatcgtcaatctcgacaaactcacctacgccggcaac
ccggataccttgagcagcgtgcaggcgcacgccgactatcgatttgttcacggtgacatc
ggcgatgccgaactggtatcgcgtctattggccgagcatcaacccgatgcggtcgtgaat
ttcgccgccgaatcgcatgtcgatcgctcgatcgacgggccggcggaatttgtccagacc
aatgttgtcggcactttgagcctgctcgaatcgaccttgaaattctggcgcacgctcgac
gaaaagaggcgcgccgagtttcgtttcctgcatgtttccaccgacgaggtttacggctcg
cttggtgccgaaggacgcttcactgaaaccacggcgtacgcgccgaattcgccatactcg
gcgtcgaaggcggcctccgatcatttggtgcgcgcgttccatcacacctacggcctgccg
acgctgacgaccaattgctcgaacaattacgggccattccagtttccggaaaagctcatc
ccgctgatgatccagaaagcgctgaccgcgcaaccgctgccggtttacggcgacggcttg
aacgtgcgcgattggctgttcgtgaccgatcattgccgcgcgatccagcgcgcgctcgaa
gcagggcgggtcggcgaggtctacaacgtcggcggtgatgccgagcgcgaaaatatccat
gtcgtcaaaactatttgcacattgctcgacgagcgccgtccgctggccgatggcaaaaaa
cgcgaggcgctgatcacctacgtcaaggataggcccggccatgatcgacgttatgcgatc
gacgcgagcaagatcaagcgcgaactcgactggtcgcaaaccgagacctttgaatccggt
atcgcgcgcaccgtcgactggtatcttgccaatcagacatggtgtcagcgtgtgctcgac
ggcagctatcgcggcgagcgtctcggcggcgcgtaa
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