Pseudolysobacter antarcticus: ELE36_06090
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Entry
ELE36_06090 CDS
T06010
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
xbc
Pseudolysobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbc03021
]
ELE36_06090 (rapA)
Transcription machinery [BR:
xbc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ELE36_06090 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Tudor_RapA
AAA_22
IMPDH
Motif
Other DBs
NCBI-ProteinID:
QBB69965
UniProt:
A0A411HHH1
LinkDB
All DBs
Position
complement(1418414..1421263)
Genome browser
AA seq
949 aa
AA seq
DB search
MAFVPGQRWISTAEPELGLGTVMRLEGRTVQVVFATSGVIRQYALTSAPLLRAEFKSGDS
VSGTGKTFIIERMELRNGIAYYHGAGMTLAEGELDDVQNVSKADERLVSGRVDRVEQFEL
RVEALQQRAEAQRSPAYGLACVRVDLIPHQLRVAEIAAARRPPRILLADEVGLGKTIEAG
LILARLLASNRVGRVLVLLPESLVFQWFVELLRRFNLSFAIFDEERCEAIEMATPGINPF
EDDQLVIASIGFLADAPKRTQQVLDAGWDLLVVDEAHHLAWSPEHSSTEYDLVDKLAQKT
PGVILLTATPEQLGRTGHFARLRLLDPARYHDLAQFQHESDGYAQLSQLAEKLQDGAALD
KPEQTDLAQRLDNDPALLAHLKSYGKGDRSSAATLIDALIDRHGTGRVMFRNRRAQVGGF
PQRVPQLSVLDGTELDDDQRQHLLAEFCSDVQQPPSPLELNYAADARLPWLLNLIETSGT
EKLLLICRSQAKVLALEEALRTRSGVKVARFHEGMSIIQRDRNAAFFAQPDGARLLLCAE
IGSEGRNFQFAHTLILWDLPLDPDMLEQRIGRLDRIGQKHPIAIHGIAFSGSAQQVLLRW
FDQGLDAFRTSPADGRELLKRFQTPLLALATQHARGAEDSDAELDVLIAETRAAHEELAA
VIHRGRDRLLELAATREAHAETLRLALLASDQNATLDAFVLRLFEQFGIENDEHGERIYL
LDPEYLSTDGFPGLQDGPQQITFDRATALSREELPLLRFDHPMVIGALELLLDGENGNCA
FLADDVLAPKTVLLECVFVLDCLAAKSLHIERFLPPTPLRAIVDTKLQSRPDYRASPSSL
QRAPDRDIEVPRYRKYLSTLVPPMRKRAEELALAEAKTVIANALQAAELELGGEIARLTA
LKRVNPSVRQQEIDALQAELAALRHALPQAHTRLDAVRFVCSADFLGLR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgttcccggacaacgttggatcagcacggcagagcccgagcttggtctgggc
accgtgatgcgcttggaagggcgcaccgtgcaagtggtgttcgccacgtccggcgtgatc
cgccaatacgcgttgacctcggccccgctgctgcgcgccgagttcaaatccggcgacagt
gtcagcggcaccggcaagaccttcatcatcgagcgcatggaattgcgcaacggcatcgcc
tattaccacggcgccggcatgaccctggccgaaggcgagctcgacgacgtgcaaaacgta
tcgaaagccgatgagcgtctggtcagcggccgggttgatcgggtcgagcaattcgagttg
cgggtcgaagccttgcagcagcgcgccgaagcacaacgctcgccggcttacggcttggcc
tgtgttcgggtcgatctgattccgcaccagttgcgcgtggccgaaatcgccgcggcgcga
cgcccgccgcgcattctgctagccgatgaagtcggcctcggcaagactatcgaagccggc
ttgattctcgcgcgcttgctggcaagtaatcgtgtcggtcgcgtgctggtgttgctaccg
gagagtttggtgttccagtggttcgtcgaactgctgcgccgatttaatctgtcgtttgca
atcttcgacgaagaacgttgcgaggcgatcgagatggcgacgccgggtatcaatccgttc
gaggacgatcagctcgtgatcgcctcgatcggctttctcgcggacgcgccgaaacgcacg
caacaagtgttggatgcgggctgggatttactggtcgtggacgaggcgcatcatctcgcg
tggtcgccggaacacagcagcaccgaatacgatctggtcgataaactcgcacagaaaacg
ccgggcgtgatcctgctcacggccacgccggaacagcttggtcgcaccggccattttgcg
cgtctgcggttgctcgatccggcgcgttatcacgatttggcgcaatttcagcacgagtcg
gacggttacgcgcaactctcgcagcttgccgaaaaactgcaggacggtgccgccctcgat
aagccggagcaaaccgatcttgcgcagcgattggacaatgatccggcgctgctggcgcat
ctgaaaagttacggcaaaggtgatcgcagcagcgccgcgaccttgatcgatgcgctgatc
gaccggcacggcaccgggcgtgtgatgttccgtaatcgtcgcgcgcaggtcggcggtttt
ccgcagcgcgtgccgcagctgagcgtgctcgatggcaccgagcttgacgatgaccaacgc
caacatttgctcgcggaattttgcagcgatgtgcaacaaccgccctcgccgctcgaactc
aattacgccgccgatgcacgcctgccgtggctgctcaatctgatcgaaaccagcggcacg
gaaaagctgctgctgatctgtcgcagccaggcaaaagtgctcgcgctcgaagaagccttg
cgcacgcgcagcggtgtgaaagtcgcgcgtttccacgagggcatgagcatcattcagcgt
gaccgcaatgctgcgttttttgcgcaacccgatggcgcacgtttgctgttgtgcgccgag
atcggttcggaaggtcgcaacttccagttcgcgcatacgctgatcctgtgggatctgccg
ctggatcccgacatgctcgaacaacgcatcggccggcttgatcgtatcggccagaaacat
ccgatcgcgattcatggcattgccttcagcggcagcgcgcagcaggtgttgttgcgctgg
ttcgatcagggcctggatgcattccgcaccagccccgccgatggccgcgaattgctcaag
cgttttcaaacgccactgctcgcgctggcgacgcaacacgcgcgcggggcggaggattcg
gatgccgaactcgatgtgctgatcgccgaaacgcgtgccgcgcacgaggagcttgccgca
gtaattcatcgtggccgcgatcgtttgctcgaactcgccgccacgcgcgaagcgcatgcg
gaaaccttgcggcttgcgttgctggcgagtgatcagaatgcgacgctcgatgcatttgtg
ctgcggttgttcgagcagtttggcatcgagaacgacgagcacggtgaacgtatttatctg
ctcgatcccgagtacctgagcaccgacggttttccgggtttacaggatggcccgcagcag
atcacgttcgatcgcgccacggcgttgtcgcgtgaagaattgccgttgctgcgcttcgat
catccgatggtgatcggcgcgctcgaacttttgctcgacggcgaaaacggcaattgcgcg
tttcttgccgacgatgtgctcgcgccaaaaaccgtgctgctcgaatgtgtattcgtgctc
gattgtctggccgcgaaatcactgcatatcgaacgctttttgccgccgacgccgctgcgt
gcgatcgtcgataccaagctgcaatcgcgaccggattatcgcgccagcccgagcagcctg
cagcgcgcgcctgatcgcgatatcgaagtgccgcgttatcgaaaatacctgtcgaccctc
gtgccaccgatgcgcaaacgcgccgaggaactcgcgctagccgaagcaaaaaccgtgatt
gccaatgcactgcaagcagccgaactcgaactcggtggcgagatagcgcgcctgaccgca
ctcaagcgcgtcaacccaagtgtgcgccagcaggaaatcgatgcgctgcaagcggaactc
gccgcgttacgacatgccttgccgcaagcgcatacgcgactcgatgcggtgcgttttgtc
tgcagcgcggacttcctcggcttgcgttga
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