Pseudolysobacter antarcticus: ELE36_09465
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Entry
ELE36_09465 CDS
T06010
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xbc
Pseudolysobacter antarcticus
Pathway
xbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ELE36_09465 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbc03400
]
ELE36_09465 (recD)
Enzymes [BR:
xbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ELE36_09465 (recD)
DNA repair and recombination proteins [BR:
xbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ELE36_09465 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
RecD_N
AAA_11
AAA_22
SLFN-g3_helicase
NAT10_TcmA_helicase
PhoH
UvrD-helicase
UvrD_C
AAA_25
nSTAND3
AAA_5
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QBB70575
UniProt:
A0A411HJ99
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All DBs
Position
2235431..2237332
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AA seq
633 aa
AA seq
DB search
MNMQTVPDHNVLGSIGLPSAFDYALADSLMHRSSMREPWLRELIAQLSAAVQQGHSCLPL
QELCDALDSSSPNDRGFSGTTAQLHERLCASGLVSNSGAESPLICDGINLYLRRYFEYER
RIAEDLLRRVCGNPVAFESLQLREQIERLFPASATTTPNWQRVAAALALRQNLTVILGGP
GSGKTWTVLRLLVLIAQQTSPPLNAVQRELEPQEKLLRIALAAPTGKAARRVSDSLQRDL
AELPVSDELRASLPREATTLHRLLGMRPHSSTPRYDRKNPLPLDVLVLDEASMIDLPSMA
RVLDALPRDARLILLGDPDQLASIEIGNVLSELRAFNVQNRYSPQAAADIAALTGAATEI
TSDATARFGDAMVTLTHSHRFSAGGSIAQLVEAVRDGDTDRACEILRHGSGVVWHEHEQN
DALAQTLQIATQKYAPLQTAATPEQALNALAHFRVLGALREGPWGTRALNASIARAQLGL
KAWQSLPPHFPSAPLLITENDHALRLYNGDSGVLLIDTQQRLRAWFADTQHGVRGLSANQ
LPAFELGYAMTVHKAQGSEYDTVLVLLPPQPHPLLTREWLYTALSRARKQLIVIGSESVL
RAAIGSPAQRWSGLAAQITGLLGTADRSAVSSS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcagacggtacctgatcacaatgttcttggatcgatcggtttgccgagtgcg
ttcgactacgcgctggcagattcgttgatgcatcgcagctcaatgcgcgagccgtggtta
cgcgaattgatcgcgcaactttccgccgccgtgcagcaaggacacagctgccttccgttg
caggagctatgcgatgcgttggactcttcatcgccgaatgatcgtggcttttccggcacg
accgcacagctgcacgagcgattgtgcgcgagtggtctggtaagcaattccggtgccgag
tcgccgctgatctgcgatggtataaatctctatttgcgacgttatttcgaatacgaacga
cgtatcgccgaagatctgctgcggcgtgtttgcggtaatcccgtggcgttcgaatcgttg
cagctgcgcgaacaaatcgagcggttatttccggccagcgcgaccacgacgccaaactgg
cagcgagtggcggcggcgctggcattgcgccagaacctcacggtgattctcggcggtccc
ggcagcggcaaaacctggaccgtgttgcgcctgctggtattgatcgcacaacagacttcg
ccgccgttgaacgcagtgcaacgcgagctggaaccacaagaaaaattgctgcgcatcgcg
ctcgccgcgcccaccggcaaggcggcgcggcgcgtgagtgacagcttgcagcgcgatctc
gccgagctgccggtgtcggatgaattgcgcgcgagtttgccgcgcgaggcgactactttg
catcgcctgctcggcatgcgtccgcatagcagcacgccgcgttacgatcgcaaaaatcca
ctgccgctggatgtgctggtgctcgatgaagcgtcgatgatcgacttgccgagcatggcg
cgtgtgctcgatgcgttgccacgcgatgcgcggttgatcctgctcggcgatccggatcaa
ctcgcatcgatcgagatcggtaatgtgctgtccgaactgcgcgcgttcaatgtgcagaat
cggtattcgccgcaagctgcagctgacatcgctgcgctgaccggagctgccacggaaatt
acgtcggatgcgaccgcgcgattcggcgacgctatggtcacgctcacgcacagtcaccgt
ttcagcgcgggcggcagtatcgcgcaactggtcgaggcagtacgcgacggcgatacggat
cgcgcctgcgagatcttgcggcatggcagtggcgtcgtctggcatgagcacgaacagaac
gatgcgctcgcgcagacactgcagattgccacgcaaaaatacgcgccgctgcaaactgcc
gcgacgcccgaacaagcgttgaatgcgctggcgcattttcgtgtgctcggtgcgttgcgc
gaagggccgtggggaacgcgcgcgctgaatgcttcgatagcgcgcgcgcagcttggtctg
aaggcatggcaatcgttgccgccgcattttccgtccgcgccgctattgatcaccgagaac
gaccacgcgctgcgtttgtacaatggagacagcggcgtgttgctgatcgatacgcagcaa
cgattgcgcgcgtggtttgccgatacgcagcatggtgtgcgcggattgtcggcgaatcag
ttgcccgcgtttgaactcggttacgcgatgactgtgcacaaggcgcagggctcggaatac
gataccgtgctggtattgctgccaccgcagccgcatccgttgctgacgcgcgagtggttg
tatacggcgctgagtcgcgcgcgaaagcaattgatcgtgattggcagcgagagcgtattg
cgcgcggcgatcggcagtcctgcgcaacgctggtcgggattagccgcgcagatcacgggc
ttgctcggcactgcagacagatctgccgtgagttcgtcataa
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