Pseudolysobacter antarcticus: ELE36_13320
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Entry
ELE36_13320 CDS
T06010
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xbc
Pseudolysobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbc03016
]
ELE36_13320
Enzymes [BR:
xbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ELE36_13320
Transfer RNA biogenesis [BR:
xbc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ELE36_13320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QBB72692
UniProt:
A0A411HQG3
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All DBs
Position
3116344..3117483
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AA seq
379 aa
AA seq
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MYRFRALSPGQRSHALFTWITQQTDLDRHLAQWQPGSSVALDTEFMRINTFAPRLALVQA
CVDGDIVLLDAPALGAMAPFAAHLANADTLTVMHSASEDLEALAPLLPNGPALLFDTQIA
ASMAGLGFGLSYQKLVALLLGIDVPKAETRSDWLKRPLSAQQLEYAAQDVEHLMPIHAQL
QTRLDELGRSAWLAEDCRRMIERICHREGDPQPQRSVRFAAHWPIEQQALLRRILLWREN
TVRLIDCPRTWLLDETHAADLAHKPPQNADELMQRTRGQRALRSEQRNALLHELQRPLSA
EEITATQPVPAVPSNAQKRAVTAMKETVVAIAAELNLPEGLLCARKHLEALVQDGVWPQA
LEGWRKTLLHDRLISLLPQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ctgtacaggttccgcgcgctttcgcccggccaacggagccacgcattgttcacctggatt
acgcagcaaaccgatctcgatcgccacctcgcgcagtggcaacccggcagcagcgttgcg
ctcgataccgagttcatgcgcatcaatacatttgccccacgtctcgcgctcgtgcaagcc
tgcgttgatggcgacatcgtcttgctcgatgcgcccgcgctcggtgcgatggcgccgttc
gccgcgcatctggccaatgccgataccctcaccgtgatgcacagcgcgagcgaggatctt
gaagcgctcgcgcccttgctgcccaacggccccgcgctgttgttcgatacgcagatcgcg
gcgagcatggccggtctcggcttcggcctgagttatcagaaactggtcgcgttgttgctc
ggcattgatgtgcccaaggccgaaacgcgttcggactggctcaagcgtccgctcagcgcg
cagcaactcgaatacgccgcgcaagatgtggagcacctgatgccgatccacgcgcagttg
caaacccgactcgatgaactcggacgcagcgcatggctcgcggaagattgccgccgcatg
atcgaacgtatctgccatcgcgagggcgatccgcagccgcaacgctcagtgcgttttgcc
gcgcactggccgatcgaacaacaagcactactgcgacgcattctgctgtggcgcgaaaac
accgtgcggctgatcgattgtccgcgcacctggctgctcgacgaaacccatgccgccgat
ctcgcgcacaaaccgccgcagaatgccgatgaactcatgcagcgcacgcgcggccagcgt
gccttgcgcagcgagcaacgcaacgccttgctgcatgagttgcaacgtccgctcagcgct
gaagaaatcacagcgacacaacctgtgccagcggtgccgagcaacgcccaaaaacgcgcg
gtgacagcgatgaaagaaaccgtagtcgccattgccgccgaattgaatctgcccgaaggt
ctgctgtgcgctcgcaagcatctcgaagcgctggtgcaggatggcgtctggccgcaggcg
ctggaaggatggcgcaaaacgctgctgcacgatcgtctgatatcgctgctaccgcagtga
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