Pseudolysobacter antarcticus: ELE36_13710
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Entry
ELE36_13710 CDS
T06010
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xbc
Pseudolysobacter antarcticus
Pathway
xbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELE36_13710 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbc03019
]
ELE36_13710 (pnp)
03016 Transfer RNA biogenesis [BR:
xbc03016
]
ELE36_13710 (pnp)
Enzymes [BR:
xbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ELE36_13710 (pnp)
Messenger RNA biogenesis [BR:
xbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ELE36_13710 (pnp)
Transfer RNA biogenesis [BR:
xbc03016
]
Prokaryotic type
tRNA degradation factors
ELE36_13710 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
QBB71325
UniProt:
A0A411HLC1
LinkDB
All DBs
Position
complement(3210770..3212878)
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AA seq
702 aa
AA seq
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MAKVTKSFQYGNHEITLETGEIARQASAVVVKMGDTVILVTAVGNKSAREGQDFFPLTVD
YQEKFYAGGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPEEFRNEVQVIATVLSMNP
EIDGDIPALIGASAALALSGMPFGGPIAAARVGYANGKYLLNPTATELKTSDLDLVVAGT
SNAVLMVESEAKLLSEEIMLGAVMFGHQQMQVVIRAINELCVEVGVKSWTWSAPSKNEAL
ITQVKGAVGDSLIAAYAVRDKIERRDAISALKKETISSLKSEAEAHGWSNAEIAKEFGEL
EYQTLRASVLATKTRIDGRDLTTVRPITVRTGVLPRTHGSALFTRGETQALVIVTLGTTR
DAQIIDAPEGESKDPFLFHYNFPPFSVGEAGRMLGPKRREIGHGRLAKRGVQAVKPSIEE
FPYVVRVVSEITESNGSSSMASVCGSSLAMMDAGVPLKSPVAGIAMGLVKEGNDFVVLSD
ILGDEDHLGDMDFKVAGSADGISALQMDIKIDGITEEIMRVALSQAKQGRLHILGEMAKV
ISSARSEMSEFAPRLLTMRVHPDKIREVIGKGGATIRSITEETGTQIDIQDDGTIIIASV
NREAAEAAKARIEQITSDVEPGKIYEGKVAKLMDFGAFVTILPGKDGLVHVSQISNERVE
KVSDKLKEGDIVRVKVLEVDKQGRIRLSMKAVLEDEAAAAAG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagtaaccaagtccttccagtacggtaatcacgaaatcacgctggagacgggc
gaaatcgcccgccaggccagcgcggtcgtcgtcaagatgggcgacaccgtcattctggtc
acggcagtcggcaacaagtcggcacgcgaagggcaggatttcttcccgctcaccgtggac
tatcaggaaaagttttatgccggcggtcgcatcccgggtggcttcttcaagcgcgaaggt
cgtccgaccgaaaaagaaacactgacctcacgcctgatcgatcgtccgattcgtccgctg
ttccccgaagaattccgcaacgaagtgcaggtcattgcgaccgtgctgtcgatgaatccg
gaaatcgacggcgacattccggccttgatcggcgcatccgccgcactcgcactttccggc
atgccgttcggcggcccgattgctgctgcccgcgtcggttatgcgaatggcaaatacctg
cttaacccgaccgcgaccgaactcaagacctccgatctcgatctcgtcgtcgccggtacc
tcaaacgcggtgctgatggtcgaatccgaagccaaactgctgtctgaggaaatcatgctc
ggcgcggtgatgtttggtcaccagcagatgcaggtcgtgatccgcgcgatcaacgaattg
tgtgtcgaagtgggcgtcaagtcgtggacgtggtcggctccgtcgaagaacgaagcgctg
atcacacaggtcaagggtgcggtcggcgatagtctgatcgccgcttacgccgttcgcgac
aagatcgagcgtcgcgatgcgatctccgcattgaagaaagaaacgatttcttcgctcaag
tcggaagctgaagcgcatggctggagcaatgccgaaatcgccaaggaattcggcgaactc
gaataccagactttgcgcgcgtcggtgcttgccaccaaaactcgtatcgacggtcgcgat
ctgaccactgtgcgtccgatcaccgtgcgcaccggcgtattgccgcgcacgcatggttcg
gctttgttcacgcgtggcgaaacccaggcgctggtcatcgttaccctcggtaccacgcgc
gatgcgcagatcattgatgcgccggaaggcgagtcgaaagacccgttcctgttccattac
aactttcctccgttctcggtcggcgaagctggtcgcatgctcggtccgaagcgtcgcgaa
atcggccacggccgtctcgccaagcgcggtgtgcaggccgtcaagccgagcatcgaagaa
ttcccgtacgtggtgcgcgtagtcagcgaaatcaccgagtcgaacggctcctcgtcgatg
gcatcggtgtgcggttcttcgctcgccatgatggacgctggtgtgccgctgaaatcgccg
gtcgccggtatcgcaatgggcttggtcaaggaaggcaacgacttcgttgtgctgtccgat
atcctcggtgacgaagatcatctcggcgacatggatttcaaggtagccggaagtgcggat
ggtatttctgcattgcagatggatatcaagatcgacggcatcaccgaagaaatcatgcgc
gtggcgctgagccaggccaagcagggtcgtctgcatatcctcggcgaaatggccaaggtc
atcagcagcgcccgctcggaaatgagcgagttcgcaccgcgtctgctgaccatgcgcgtg
cacccggacaagatccgcgaagtcatcggcaagggcggcgcaacgatccgttccatcacc
gaagaaaccggcacgcagatcgacatccaggacgacggcacgatcatcatcgcctcggtc
aaccgtgaagctgccgaagccgcgaaagcgcgcatcgaacagatcacgtctgatgtcgag
ccgggcaagatctacgaaggcaaagtcgccaagctcatggacttcggtgcatttgtcacg
atcctgccgggcaaggatggtctggttcacgtttcgcaaatctccaacgagcgcgtcgag
aaagtttccgacaagctcaaggaaggcgacatcgtgcgcgtgaaggtgctcgaagttgac
aagcagggccgtattcgtttgtcgatgaaggctgtgctcgaagacgaagccgccgcagcc
gcaggctga
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