Pseudolysobacter antarcticus: ELE36_13920
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Entry
ELE36_13920 CDS
T06010
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xbc
Pseudolysobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
xbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbc03016
]
ELE36_13920 (truD)
Enzymes [BR:
xbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ELE36_13920 (truD)
Transfer RNA biogenesis [BR:
xbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ELE36_13920 (truD)
Prokaryotic type
ELE36_13920 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QBB71361
UniProt:
A0A411HLI4
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All DBs
Position
complement(3251976..3253034)
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AA seq
352 aa
AA seq
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MSESELPRAHGGASLCGILRATPDDFLVEEDLGFTPSGAGEHALVVVEKRGANTDWVARQ
LAAFAGVAPFAVSFAGLKDRHALTRQTFSLHLPGKADPDWAQLQNAEFRILDAQRHNRKL
KRGALKGNRFRIVLREVGGDRAATEQRLIAIGAHGVPNYFGEQRFGRNGGNVAQARAMFA
GRRVERSMRGLLLSAARSHLFNHVLAKRVAAGNWNQALSGDVWMLHGSHAIFGPEPISDN
IQRRLHEGDIHPTAPLWGRGALRSTDDVALLEQAVMQRDPDLANGLETAGLEQERRSLCL
RPRDLAFEWLPENALAVSFWLPAGAYATTLLREFCDYRTAQTFVADESAELE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatccgaactcccgcgagcgcacggcggcgcgtctttatgcggcatattgcgc
gcaacacctgatgattttctggtcgaggaggatctcggtttcaccccgagcggcgctggc
gagcacgcgctggtggtggtcgaaaaacgtggcgcgaataccgattgggtggcgcgccag
ctcgcggcgtttgccggcgtagctccatttgccgtgagttttgcaggcttgaaggatcgg
cacgcactgacgcgacagacgttttcgttgcatctgcccggcaaggccgatccggattgg
gcgcagttgcagaacgccgagtttcgtattctcgatgcgcaacgtcacaaccgcaaactc
aagcgcggtgcgctgaaaggcaatagattccgcatcgtattgcgcgaagttggtggtgat
cgagccgcgacggaacaacgcctgatcgcgatcggcgcgcacggcgtgccgaattatttt
ggcgagcagcgcttcggtcgcaatggcggcaatgtggcgcaggcgcgcgcgatgttcgcc
gggcgacgcgttgagcgcagcatgcgtggcttgttgttatcggcggcgcgttcgcatctg
ttcaaccatgtgttggccaaacgcgttgcggctggcaactggaatcaagcgctgtcgggc
gatgtgtggatgctgcacggcagtcatgcgattttcgggcctgagcctatcagcgataac
atccagcgtcggctgcatgaaggcgatattcatccaactgcgccgctgtggggacgcggt
gctttacgcagcaccgacgatgtcgcgctattggaacaggcggtgatgcagcgtgatccc
gatctggctaacgggctggaaacggcaggcctcgagcaagagcgccgctcgctgtgcttg
cgtccgcgtgatctggctttcgagtggctgccggaaaatgcgctggcggtaagtttctgg
ctgccggctggtgcgtatgccaccaccttgctgcgcgagttttgcgactatcgaaccgcg
cagacattcgtcgccgacgagtcggctgaacttgagtga
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