Xanthomonas bundabergensis: AB3X10_03000
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Entry
AB3X10_03000 CDS
T10887
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xbn Xanthomonas bundabergensis
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbn03021
]
AB3X10_03000 (rpoH)
Transcription machinery [BR:
xbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB3X10_03000 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_11
HTH_AsnC-type
KORA
HTH_3
HTH_10
Phage_terminase
GntR
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
XEA91562
LinkDB
All DBs
Position
675147..676025
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AA seq
292 aa
AA seq
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MSQTIPATALVANNLPIPSPLGSLDAYIGAVHQIPVLTSEEERALAVRYRDQEDLDAARE
LVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPEMGVRLVSFAVHWIRAE
MHEYILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVTAVAKDLNVSEREVLEME
SRLSGRDIGFDAPSDDDDDHAPPSPAAYLMAAEEDPSQAYERADSEDNQLQLLREGLAEL
DARSRDIIKRRWLDADSKITLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccatacctgccaccgcgctggtggccaacaatctcccgatccccagtccg
ctcggttcgctggatgcctatatcggcgccgtgcaccagatcccggtgctgacgtccgaa
gaggaacgcgcgctggcggtgcgttaccgcgaccaggaagacctggatgcggcgcgcgaa
ctggtccactcccacctgcgcttcgtggtccacgtggcccgcggctacaacggctacggc
ctgccgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgc
ttcgacccggaaatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgag
atgcacgagtacatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcag
cgcaagctgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgccgcg
gaagtgaccgcggtcgccaaggacctcaacgtgtccgagcgcgaggtgctggagatggag
tcgcgcctgtccggtcgcgacatcggcttcgacgcgccgtccgacgacgatgacgatcac
gcgccgccgtcgccggccgcctacctgatggccgccgaggaagacccctcgcaggcctac
gagcgcgccgacagcgaggacaaccagctgcagctgctgcgcgaaggcctggccgagctg
gatgcgcgttcgcgcgacatcatcaagcgccgctggctggacgcggacagcaagatcacg
ctgcaggagctggccgacgagtacggcgtgtcggccgagcgcatccgccagatcgaggcc
aacgcgctgaagaagatgaaggcgttgttcgtggcgtga
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