Xanthomonas bundabergensis: AB3X10_03500
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Entry
AB3X10_03500 CDS
T10887
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
xbn Xanthomonas bundabergensis
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xbn02022
]
AB3X10_03500
Two-component system [BR:
xbn02022
]
NtrC family
Unclassified
AB3X10_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
HTH_28
HTH_30
HTH_50
AAA_2
HTH_29
HTH_23
Phage_NinH
AAA_7
nSTAND3
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
XEA91656
LinkDB
All DBs
Position
805690..807027
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AA seq
445 aa
AA seq
DB search
MARILIVDDDTAFSSTLQATLRSFGHEVVAAADGEAGLARLREGGIDLAFVDFRMPGMDG
IALMRARQAHAQAAAVPLVMLTAHASSGNTIEAMKLGAFDHLVKPVGRADIVAVVERALQ
AHAGADSAAPPPAPAEDAGALLGHSAAMRTVHKRIGLAAASDLPVLISGETGTGKELVAR
ALHRASARAGAAFVAVNCAAIPTELMESELFGYRKGAFSGASADRAGLIREADGGTLFLD
EIGDMPLPMQAKLLRFLQEGEVSPLGGRGAQKVDVRVVAATHRELAQLVADGRFRSDLRY
RLNVVPIELPPLRERGDDIVLLARHFLEDGASAARTLSAAAQARLLAYAWPGNVRELRNA
MQRCQVLVRTPAIEAHDLDEVLVGEGDAAAADTPALTLPDAVAQLEKRMIQAALAQAQGN
RAEAARRLGIHRQLLYRKLDEYGLG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcctgatcgtcgacgacgacaccgccttctcgagtacgctgcaggccacg
ctgcgttcgttcggccacgaggtggtcgccgccgccgatggcgaggcgggcctggcgcga
ttgcgcgaaggcggcatcgacctggccttcgtcgatttccgcatgcccggcatggacggc
atcgcgctgatgcgcgcgcgccaggcccatgcgcaggccgccgcggtgccgctggtgatg
cttaccgcgcatgcgtccagcggcaacaccatcgaggcgatgaagctcggcgcgttcgac
cacctggtcaagccggtgggccgcgccgacatcgtcgcggtggtggagcgcgcgctgcag
gcgcatgccggcgccgacagcgcggcgccgccgccggcaccggccgaggacgccggcgcg
ctgctcggccacagcgcggcgatgcgcaccgtgcacaagcgcatcggcctggccgccgcc
tcggacctgccggtgctgatcagtggcgagaccggcaccggcaaggaactggtggcgcgc
gcgctgcatcgcgccagcgcccgcgcgggggcggcgttcgtcgcggtcaattgtgcggcg
atcccgaccgagctgatggagagcgagctgttcggctaccgcaagggcgcgttctccggc
gccagcgccgatcgcgccgggctgatccgcgaggccgacggcggcaccttgttcctggac
gagatcggcgacatgccgctgccgatgcaggccaagctgctgcgtttcctgcaggagggc
gaggtctcgccgctgggcggacgcggcgcgcagaaggtggacgtgcgcgtggtcgccgcc
acccatcgcgaactggcgcagctggtcgccgacggccgcttccgcagcgacctgcgctac
cggctcaacgtggtgccgatcgaattgccgccgctgcgcgagcgcggcgacgacatcgtg
ctgctggcccggcatttcctcgaggacggcgccagcgcggcacggacgctgtccgcggcg
gcgcaggcgcggctgctcgcctacgcgtggccgggcaacgtgcgcgaactgcgcaacgcg
atgcagcgctgccaggtgctggtgcgcacgccggcgatcgaggcgcacgacctggacgag
gtgctggtcggcgagggcgacgcggcggcggccgacacgcccgcgctgaccctgcccgat
gcggtcgcgcaactggagaagcggatgatccaggcggcgctggcgcaggcccagggcaac
cgcgccgaggccgcgcgccggctcggcatccatcgccagctgctgtatcgcaagctcgac
gagtacgggctgggctag
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