Xanthomonas bundabergensis: AB3X10_03860
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Entry
AB3X10_03860 CDS
T10887
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xbn Xanthomonas bundabergensis
Pathway
xbn00040
Pentose and glucuronate interconversions
xbn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AB3X10_03860
Enzymes [BR:
xbn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
AB3X10_03860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-ProteinID:
XEA91718
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All DBs
Position
899042..900460
Genome browser
AA seq
472 aa
AA seq
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MTSRTTFPVLGCLLALATLDASAATGDTRMVAEPTVPSVCGQPLVAALQTGDRTFSAAQE
QSPPDTARIQAALDTCAAAGGRTAVLLRAGAGNAFLSGPLTIGSNVTLVIDAGVTLFGSR
KPSDYQVAGANACGKAAGSSGGCRALINLKGKSLGVMGLRNSAGRQGTIDGRGDLPMLGG
SDSWWQFGEKAKASNLTQNSPDLIKVQNSSDVSFYHVNLINAPYFHLFAHIADGLTIWGV
RVKAPASSPNTDGLDLDSVSNATLYDNDVMGGDDGVAIKTIASRSANISVRNSRFYGTHG
LSIGSEVMYGVDNVLVDGNSVVGSDANGTPSTDNNGLRIKTGLAKGGAVNDVTYRNTCLF
GVANALVINPLYSGGSSGTVPTFTKIVVNGLKAQGSPKGKGNAVQGYNASAPLDLVLANV
SADVTALKASNARIGVDRSNLQLTADSTASTYATSVSGAVPACSAKPVFPAL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccgtacaactttcccggtcctcggctgcctgctggcgctggcgacgctcgac
gcatccgccgccaccggcgatacgcgcatggtcgccgagccgaccgtccccagcgtctgc
gggcagccgctcgtcgccgcgctgcagacgggcgatcgcaccttcagcgccgcacaggaa
cagagcccgccggataccgcgcgcatccaggccgcgttggacacctgcgcggccgccggc
ggccgcacggcggtgctgttgcgtgccggcgccggcaacgccttcctcagcgggccgctg
accatcggcagcaacgtgaccctggtgatcgacgccggcgtcaccctgttcggctcgcgc
aagccgtcggactaccaggtcgccggcgccaacgcctgcggcaaggccgccggttccagc
ggcggctgccgcgcgctgatcaacctcaagggcaagtcgctgggggtgatgggcctgcgc
aacagcgccggccgccagggcaccatcgatggccgcggcgacctgccgatgctcggcggc
agcgacagctggtggcagttcggcgagaaggccaaggcgagcaacctgacccagaacagc
cccgacctgatcaaggtgcagaattccagcgacgtgagcttctaccacgtcaatctgatc
aacgcgccgtacttccacctgttcgcgcacatcgccgacggtctcaccatctggggcgtg
cgggtcaaggcgccggccagcagcccgaacaccgacggcctggacctggacagcgtcagc
aacgccaccctgtacgacaacgacgtgatgggcggcgacgacggcgtggcgatcaagacc
atcgcctccaggtcggccaacatcagcgtgcgcaattcgcgcttctacggcacccacggc
ctctccatcggcagcgaggtgatgtacggcgtggacaatgtcctggtcgacggcaacagc
gtggtcggcagcgatgccaacggcacgcccagcaccgacaacaacggcctgcggatcaag
accggcctggccaagggcggcgcggtcaacgacgtgacctaccgcaacacctgcctgttc
ggcgtggccaatgcattggtgatcaacccgctgtacagcggcggcagcagcggcaccgtg
ccgaccttcaccaagatcgtggtcaacggcctgaaggcgcagggctcgccgaagggcaag
ggcaatgcggtgcagggctacaacgcgtcggcgccgctggacctggtgctggccaacgtg
tccgcggacgtcaccgcattgaaggccagcaacgcgcgcatcggcgtggaccgctccaac
ctgcaactgaccgccgacagcacggccagcacctatgcgacctcggtgtccggcgcggtg
ccggcgtgcagcgccaagccggtgtttcccgcgctgtag
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