Xanthomonas bundabergensis: AB3X10_12690
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Entry
AB3X10_12690 CDS
T10887
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xbn Xanthomonas bundabergensis
Pathway
xbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3X10_12690 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbn03019
]
AB3X10_12690 (pcnB)
Enzymes [BR:
xbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AB3X10_12690 (pcnB)
Messenger RNA biogenesis [BR:
xbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB3X10_12690 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3136
DUF6448
Motif
Other DBs
NCBI-ProteinID:
XEA93260
LinkDB
All DBs
Position
complement(3011898..3013262)
Genome browser
AA seq
454 aa
AA seq
DB search
MINPPVPSPFTLQLIPRDQHNVSRKDISPNALRVLYRLREAGFGAYLVGGAVRDLLVELQ
PKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVYGREIIEVATFRANVDDGSGDRELD
NGRLVRDNVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGFADVQARLMRLIGDPEQR
YREDPVRMLRAVRLAAKLDFEIEAATAEPIPRLAGLLAEAAPARLFEEVLKLFLSGNGVA
SFEGLERYGLLAALFPESAAALNSNRSGALRRMLVEGLRNTDARVANDEPVSPAFLFALL
LWPAYCRALMALQKQGMQLEEAQRRAADRVTLHQLSTVALPRRFSLPMQEIWLLQSRFTS
RQRKRVVRTLSHPRFRAAFDFLILRQSASAEHEADIAYWRELQQQPGYAPPPRGFDPEID
YVGDEVAMAPADSEETPKRRRRRRRRPDAAAPAE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atcatcaatccgccagttccatcgccgttcactctgcagttgatcccgcgcgatcagcac
aacgtctcgcgcaaggacatcagtcccaatgcgttgcgcgtgctgtaccggctgcgcgaa
gccggcttcggcgcatacctggtcggcggcgcggtccgcgacctgctggtcgagctgcag
cccaaggacttcgacgtcgccaccgacgccacccccgagcaggtcaagcagctgttccgc
aactgccgcctgatcggccgccgcttccgcctggcgcacgtggtctacggccgcgagatc
atcgaagtggccacgttccgcgccaacgtcgacgacggcagcggcgaccgcgagctcgac
aacggccgcctggtccgcgacaacgtctacggcagcatcgaggacgacgcggtgcgccgc
gacttcacctgcaacgcgctgtactacgcgatcgaggatttctcggtgcgcgactacacc
ggcggcttcgccgacgtgcaggcgcggctgatgcgcctgatcggcgaccccgagcagcgc
taccgcgaagacccggtgcgcatgctgcgcgcggtgcgcctggccgccaagctggatttc
gagatcgaagcggccaccgccgagccgatcccgcgcctggccgggctgctggccgaagcg
gcgccggcgcggctgttcgaggaagtgctgaagctgttcctgtccggcaacggcgtggcc
agcttcgaaggcctggaacgctacggcctgctggccgcgctgttcccggagagcgccgcg
gcgctcaactccaaccgcagcggcgcgctgcggcggatgctggtcgaaggcctgcgcaac
accgatgcgcgggtggccaacgacgagccggtgtcgccggcgttcctgttcgcgctgctg
ctgtggccggcctactgccgcgcgctgatggcgctgcagaagcagggcatgcagctggag
gaggcgcagcgccgcgccgccgaccgggtgaccctgcaccagctgagcacggtcgcgctg
ccgcggcgcttctcgctgccgatgcaggagatctggctgctgcagtcgcgcttcacctcg
cgccagcgcaagcgggtggtgcggacgctgtcgcacccgcgcttccgcgccgcgttcgat
ttcctgatcctgcgccagtcggcctcggccgagcacgaggccgacatcgcctactggcgc
gaactgcagcagcagcccggctacgcgccgccgccgcgcggcttcgacccggagatcgac
tacgtcggcgacgaggtggcgatggctccggccgacagcgaggaaacccccaagcgccgc
cggcgccggcgccggcgtccggatgccgccgccccggccgagtga
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