Xanthomonas bundabergensis: AB3X10_13760
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Entry
AB3X10_13760 CDS
T10887
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xbn Xanthomonas bundabergensis
Pathway
xbn00020
Citrate cycle (TCA cycle)
xbn00190
Oxidative phosphorylation
xbn00650
Butanoate metabolism
xbn00720
Other carbon fixation pathways
xbn01100
Metabolic pathways
xbn01110
Biosynthesis of secondary metabolites
xbn01120
Microbial metabolism in diverse environments
xbn01200
Carbon metabolism
Module
xbn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xbn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xbn_M00149
Succinate dehydrogenase, prokaryotes
xbn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB3X10_13760 (sdhA)
00650 Butanoate metabolism
AB3X10_13760 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AB3X10_13760 (sdhA)
00720 Other carbon fixation pathways
AB3X10_13760 (sdhA)
Enzymes [BR:
xbn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AB3X10_13760 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
XEA89252
LinkDB
All DBs
Position
complement(3259928..3261718)
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEDGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMAEGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPEVINEKLPGIAESAHIFAGVDVAKQPIPVIPTVHYNM
GGIPTNYHGEVVRKDGDNPDSVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETIKTGAPHKTLASDSCDKALGLLDKLRNSNGGTPTSVIRDKMQRTMQSDAAVFRTS
KTLKEGVDKMAEIYATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVTVDDKGQCSFDYRPVHMYTLSKDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcaccgaacacaagtacgacatggtcgtggtcggcgccggcggc
gccggcctgcgcgccaccttcggcctggccgccaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccgttcgcacaccgtggccgcgcagggcggcatttccgccgcgctc
ggcaacatgggcgaggacgactggcgctaccacttctacgacaccatcaagggctcggac
tggctgggcgaccaggacgcgatcgagtacatgtgccgcgaggcgatcccggcgatcatc
gagctggagcactacggcgtgccgttcagccgcaccgaggacggcaagatctaccagcgt
ccgttcggcggcatgaccaccaagtacggcgaaggcccgtccgcgcagcgcacctgcgcc
gccgccgaccgtaccggccacgccatgctgcacacgctgtaccagcagtcgctggcgcac
aacgcgcgcttcatgatcgagtacttcgcgctcgacctgatcttcgacgaggaaggggtg
tgccgcggcgtgctcgcgctggacatggccgaaggctcgctgcacctgttccgcgcccac
ggcgtggtgctggccaccggcggctacggccgcgcctacttcagcgccacctccgcgcat
acctgcaccggcgacggcggcggcctggtgatgcgcgccggcctgccgatgcaggacatg
gagttcgtgcagttccatcccaccggcatctacggcgccggctgcctgatcaccgaaggc
gtgcgcggcgaaggcggcatcctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcgccgcactacaaggacctggcctcgcgcgacgtggtgtcgcgttcgatgaccatcgag
atccgcgaaggccgcggcgtcggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccggaagtgatcaacgagaagctgcccggcatcgccgagagcgcgcacatcttc
gccggcgtggacgtggccaagcagccgatcccggtgatcccgaccgtgcactacaacatg
ggcggcatccccaccaactaccacggcgaagtggtgcgcaaggacggcgacaaccccgat
tcggtggtgcccggcctgtacgcgatcggcgaagcggcctgcgtgtcggtgcacggcgcc
aaccgcctgggctccaactcgctgctggacctggtggtgttcggccgcgcggtcgccaac
cgctgcgccgagaccatcaagaccggcgcgccgcacaagaccctggccagcgattcctgc
gacaaggcgctgggcctgctcgacaagctgcgcaattccaacggcggcaccccgacctcg
gtgatccgcgacaagatgcagcgcaccatgcagtccgacgcggcggtgttccgcaccagc
aagacgctgaaggaaggcgtggacaagatggccgagatctacgccaccttcgaggacgtg
aaggtctccgaccgttcgctggtgtggaattcggacctgatcgagacctacgagctgaac
aacctgctgctcaacgcggtggcgacgatcaactcggccgaacagcgcaaggaaagccgc
ggcgcgcatgcgcacgaggatttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtcaccgtcgacgacaagggccagtgcagcttcgactaccgcccggtgcacatgtac
acgctcagcaaggacgttgacgtggtgccgccgaaaccgcgcgtctactga
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