Xanthomonas bundabergensis: AB3X10_14920
Help
Entry
AB3X10_14920 CDS
T10887
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xbn Xanthomonas bundabergensis
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xbn03009
]
AB3X10_14920 (rimO)
Enzymes [BR:
xbn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AB3X10_14920 (rimO)
Ribosome biogenesis [BR:
xbn03009
]
Prokaryotic type
ribosomal protein modification factors
AB3X10_14920 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
PrmA
CSD2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XEA89466
LinkDB
All DBs
Position
complement(3541795..3543192)
Genome browser
AA seq
465 aa
AA seq
DB search
MSLANPKVGFVSLGCPKALVDSERILTQLRVEGYAIVPSYDAADVVVVNTCGFIDSAVAE
SMEAIGEAMAENGKVIVTGCLGKRSEQIRAAYPDVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLLPRGRHGVRDEDGIGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLDSRPVDE
VLREAERLVKGGVRELLVVSQDTSAYGVDLKYAEREWRGRAYQTRMKALCEGLSELGVWT
RLHYVYPYPHVDEVIPLMAEGRLLPYLDIPFQHASPRILRLMKRPGAVERTLERVQRWRA
LCPDITLRSTFIVGFPGETEAEFEQLLDFLDAAQLDRVGAFAYSPVEGASANALPDPVPE
PVKQERLARFMARQAGISAARLEAKIGSVQQCLVDLLEDGIAVARSRADAPEIDGLVHIQ
NGAERGLQPGDLVDVEITDSDEHDLFGDALPAGAAPPRALDLRVL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgccaaccccaaagtcggcttcgtcagccttggctgtcccaaggccttggtc
gattccgaacgcatcctcacccagctgcgcgtggagggctatgcgatcgtgcccagctac
gacgcggccgacgtggtggtggtcaatacctgcggcttcatcgactcggcggtggccgaa
tcgatggaggcgatcggcgaggccatggccgagaacggcaaggtcatcgtcaccggttgc
ctgggcaagcgctccgagcagatccgcgcggcctatccggacgtgctggcggtgtccggg
ccgcaggactaccagagcgtgatggaggcggtgcatgcggcgttgccgccgcgccacgac
ccgttcgtggatctgctgccgcgcgggcgccacggcgtgcgcgacgaggacggcatcggg
gtcaagctgaccccgcgccactacgcctacctgaagatctccgagggctgcaaccaccgc
tgcagcttctgcatcattccctcgatgcgcggcgacctggattcgcgcccggtcgacgag
gtgctgcgcgaggccgaacgcctggtcaagggcggcgtgcgcgagctgctggtggtgtcg
caggacacctcggcctacggcgtggacctgaagtacgcggagcgcgaatggcgcggccgc
gcctaccagacgcggatgaaggcgctgtgcgagggcctgtcggaactgggcgtgtggacg
cggctgcactacgtgtatccgtacccgcacgtggacgaggtgatcccgctgatggccgag
ggccggctgctgccgtacctggacattccgttccagcacgccagcccgcgcatcctgcgg
ctgatgaagcggccgggcgcggtcgagcggaccctggagcgggtgcagcgctggcgcgcg
ctgtgtccggacatcaccttgcgttcgaccttcatcgtcggtttccccggcgagaccgag
gccgagttcgagcagttgctggacttcctcgacgccgcccagctcgaccgcgtcggcgcc
ttcgcctattcgccggtggagggcgccagcgccaacgcgctgcccgacccggtgccggag
ccggtcaagcaggagcggctggcgcgcttcatggccaggcaggccggcatctccgcggcg
cgcctggaagccaagatcggcagcgtgcagcaatgcctggtcgacctgctcgaggacggc
atcgcggtggcgcgctcgagggccgatgcgccggagatcgacggcctggtgcacatccag
aacggcgccgagcgcggcctgcagccgggcgacctggtggatgtggagatcaccgacagc
gacgagcacgacctgttcggcgacgcgctgccggccggtgcggcgccgccgcgcgcgctg
gacctgcgggtgctgtga
DBGET
integrated database retrieval system
