Xanthomonas bundabergensis: AB3X10_16410
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Entry
AB3X10_16410 CDS
T10887
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
xbn Xanthomonas bundabergensis
Pathway
xbn00260
Glycine, serine and threonine metabolism
xbn00630
Glyoxylate and dicarboxylate metabolism
xbn00670
One carbon pool by folate
xbn00785
Lipoic acid metabolism
xbn01100
Metabolic pathways
xbn01110
Biosynthesis of secondary metabolites
xbn01200
Carbon metabolism
Module
xbn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB3X10_16410 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB3X10_16410 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AB3X10_16410 (gcvP)
00670 One carbon pool by folate
AB3X10_16410 (gcvP)
Enzymes [BR:
xbn01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AB3X10_16410 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
XEA89749
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Position
3899128..3901989
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AA seq
953 aa
AA seq
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MSHTPSLRDLEHHSAFVERHIGPNDAEIAHMLRTVGHDSLEALTDAIVPGKIKSPAALAL
PDAITEEEALAKIGAIADRNQVLRSFIGQGYYGTHTPKVILRNILENPAWYTAYTPYQAE
ISQGRMEALINFQTMCADLTGMEIANASLLDEATAAAEAMTLAKRSAKAKSDTFFVHDAV
HPQTLELLRTRAEPLGIVLRVGTPEEALQAECFGVLLQYPDSFGHIGDHKALAEAVHARG
GLVAVATDLLALTLIAAPGEWGADIVVGNSQRFGVPFGFGGPHAAFMACRDAYKRSMPGR
LIGVSIDAAGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPDGLTRI
ARRTHRLAAILAAALRSAGVAVGERFFDTLHVKAIDAEAIHAKARAAGINLRAIDSEALG
ISLDETSTRADVVALAQLFGAHVDIDALDAATADALPQGLLRSSAFLQHPVFNTHHSEHE
LLRYMRALADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPQFGAIHPLAPAAQSAGYAQ
LIGELEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEAHRDICLIPESAHGT
NPASAQMCGMKVVVTKCDANGNVDVDDIRAQAEKYSERLAALMITYPSTHGVFEEDVVAI
CEAVHAHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCAVK
LHLAPFLPRTLGGDGDVGMVSAASFGSASILPISWMYITMMGSAGLRKATQVALLNANYI
AKRLAPHYRTLYTGRNGLVAHECILDVRPLEKTTGIGAEDVAKRLIDFGFHAPTLSFPVA
GTLMVEPTESESLHELDRFIDAMIQIREEIAAIEDGRLDREDNPLKHAPHTAAQVTAGEW
THAYPRELAAFPLPTLKQAKYWPPVARVDNVYGDKNVMCACIPVDAYKDDVVA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaccccctcgctgcgcgacctcgaacaccactcggccttcgtcgagcgccac
atcggcccgaacgacgccgaaatcgcgcacatgctgcgcaccgtcggccacgactcgctg
gaggcgctgaccgacgccatcgtcccgggcaagatcaagtcgccggccgcgctggcgctg
cccgatgcgatcaccgaagaggaggcgctggccaagatcggcgccatcgccgacaggaac
caggtgctgcgcagcttcatcggccagggctactacggcacccacacgccgaaggtgatc
ctgcgcaacatcctcgagaacccggcctggtacaccgcctacacgccgtaccaggcggag
atctcgcagggccgcatggaagcgctgatcaacttccagaccatgtgcgcggacctgacc
ggcatggagatcgccaacgcctcgctgctggacgaggccaccgccgcggccgaggcgatg
accctggccaagcgttcggccaaggccaagtccgacaccttcttcgtgcacgacgcggtg
catccgcagaccctggaactgctgcgcacccgcgccgagccgctgggcatcgtgctgcgc
gtgggcacgccggaggaagcgctgcaggccgagtgcttcggcgtgctgctgcagtatccg
gacagcttcggccacatcggcgaccacaaggcgctggccgaggccgtgcatgcgcgcggc
ggcctggtcgcggtggccaccgacctgctggcgctgaccctgatcgccgcgcccggcgaa
tggggcgcggacatcgtggtcggcaactcgcagcgcttcggcgtgccgttcggcttcggc
ggcccgcacgccgcgttcatggcctgccgcgacgcctacaagcgctcgatgccggggcgc
ctgatcggcgtgtcgatcgacgcggccggcaaccccgcctaccgcctcaccctgcagacc
cgcgagcagcacatccgccgcgagaaggccacctccaacatctgcaccgcgcaggtgctg
ctggcggtgatggcctcgatgtacgcggtctaccacggccccgacggcctgacccgcatc
gcccggcgcacccatcgcctggccgcgatcctggccgcggcgctgcgcagcgccggcgtc
gccgtcggcgagcgcttcttcgacacgctgcacgtcaaggcgatcgacgccgaggcgatc
catgccaaggcgcgcgcggccggcatcaacctgcgcgcgatcgacagcgaggcgctgggc
atcagcctggacgaaaccagcacccgcgccgacgtggtcgcgctggcgcagctgttcggc
gcgcacgtcgacatcgacgcgctcgatgccgccaccgccgatgcgctgccgcagggcctg
ctgcgcagcagcgcgttcctgcagcacccggtgttcaacacccaccacagcgagcacgaa
ctgctgcgctacatgcgcgcgctggccgacaaggacctggcgatggatcgcaccatgatc
ccgctgggcagctgcaccatgaagctcaacgccaccgccgagatgatcccggtgacctgg
ccgcagttcggcgcgatccatccgctggcgccggccgcgcaatccgccggctacgcgcag
ctgatcggcgaactggaagcgatgctggtcgaatgcaccggctacgacgcggtcagcctg
cagcccaactccggcgcgcagggcgaatacgccggcctgctggcgatccgcgcctatcac
cgttcgcgcggcgaggcgcatcgcgacatctgcctgatccccgagtccgcgcacggcacc
aacccggcctcggcgcagatgtgcggcatgaaggtcgtggtgaccaagtgcgacgccaac
ggcaacgtcgatgtcgacgacatccgcgcccaggccgagaagtacagcgagcgcctggcc
gcgctgatgatcacctacccgtccacccacggcgtgttcgaggaagacgtggtggcgatc
tgcgaggcggtgcatgcgcacggcggccaggtctataccgacggcgccaacatgaacgcg
ctggtcggcgtggccaagcccggcaagtggggctcggacgtgtcgcacctgaacctgcac
aagaccttctgcatcccgcacggcggcggcggcccgggcgtcggcccgtgcgcggtgaag
ttgcacctggcgccgttcctgccgcgcaccctcggcggcgacggcgacgtcggcatggtc
agcgcggccagcttcggcagcgcctcgatcctgccgatcagctggatgtacatcaccatg
atgggcagcgccggcctgcgcaaggcgacccaggtcgcgttgctcaacgccaactacatc
gccaagcgcctggccccgcactaccggacgctgtacaccggccgcaacggcctggtcgcg
cacgagtgcatcctcgacgtgcgtccgctggagaagaccaccggcatcggcgccgaggac
gtggccaagcgcctgatcgacttcggcttccacgcgccgacgctgagcttcccggtcgcc
ggcacgctgatggtggagccgaccgagagcgaatcgctgcacgagctggaccgcttcatc
gacgcgatgatccagatccgcgaggagatcgccgcgatcgaggacggccgcctggaccgc
gaggacaacccgctcaagcacgccccgcacaccgccgcgcaggtcaccgccggcgagtgg
acccacgcctacccgcgcgagctggccgcgttcccgctgcccacgctcaagcaggccaag
tactggccgccggtggcgcgggtggacaacgtctacggcgacaagaacgtgatgtgcgcg
tgcatcccggtggatgcctacaaggacgatgtggtggcgtaa
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