| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
xbn Xanthomonas bundabergensis
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| Pathway |
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| Brite |
Enzymes [BR:xbn01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3X10_17725 (rpoC)
Transcription machinery [BR:xbn03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3X10_17725 (rpoC)
DNA repair and recombination proteins [BR:xbn03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3X10_17725 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4181968..4186185)
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| AA seq |
1405 aa
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLLTEEQFLTARQEHGDDFDAAM
GAEAVYELLRTIDLQSEMTRLREEIAGTGSETKLKRLTKRIKLVEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHECGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANIAEVKRAYDNR
AVELHAKVKVRITETVIDEDGNRSKKTSIVDTTIGRALLAEILPEGLPFALANTELTKKN
ISRLINSSYRQLGLKDSVVFADKLMYTGFAYATRAGVSIGIDDMLIPSEKKGILGEAEQE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVVNAKGETIDQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEPDCGTTDGLTMTPIVEGGDVVEPLRDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEQWVAKLEEAGVQTLKVRSTITCESSFGVCARCY
GRDLARGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSIK
FNNLKSVEHANGSLVAVSRSGELSVLDGHGRERERYKLAYGATITAKDGDAVKAGQSVAN
WDPHNHPIVSEVAGFIRFIDFIDGVTVIEKTDDLTGLASREITDPKRRGTQAKDLRPIVR
IVDGKGNDLTIPGTDLPAQYLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAILAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQIIVFE
GEHVAKGETVVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEITDQGNSKFLNGEQAERQRVIEENARLATRNELPAKYDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTSDTLRGLKENVIVGRLIPAGTGLAYHSLRRRNSSGLTESE
MQTLSGGNAEPAVETPAPAAASSEE |
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| NT seq |
4218 nt +upstreamnt +downstreamnt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgctggcctcgccggacctgatccgttcgtggtccttcggcgaagtgaagaag
ccggaaaccatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgccgcc
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtctgcgagaagtgcggcaccgaagtgaccctggccaaggtgcgccgcgag
cgcatgggccacatcgacctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtggtgaccgagccgggcctgaccgccctggagcgccgccagctgctg
accgaagagcagttcctgaccgcgcgccaggagcacggcgacgacttcgacgccgcgatg
ggcgccgaggcggtgtacgagctgctgcgcacgatcgacctgcagtcggaaatgacccgc
ctgcgcgaggaaatcgccggtaccgggtctgaaaccaagctcaagcgcctgaccaagcgc
atcaagctggtcgaagccttcctcgagtcgggcaaccgtccggagtggatggtgatgacc
gtgctgccggtgctgccgccggacctgcgtccgctggtgccgctggacggcggccgcttc
gcgacctccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgt
cgcctgctcgagctcaatgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gagtcggtggatgcgctgctggacaacggccgccgcggccgtgccatcaccggcaccaac
aagcgcccgctgaagtcgctggccgacatgatcaagggcaagcagggccggttccgccag
aacctgctcggcaagcgcgtggactactccggccgttcggtcatcgtggtcggtccgacc
ctgcgcctgcacgagtgcggcctgccgaagaagatggcgctggagctgttcaagccgttc
gtgttcgccaagctgcagcgtcgcggcctggccaccaccatcaaggccgccaagaagctg
gtcgagcgcgaagaagccgaagtctgggacatcctggaagaggtcatccgcgagcacccg
gtgctgctgaaccgcgcgccgaccctgcaccgcctgggcatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcatccgctggtgtgtaccgcgttcaacgccgac
ttcgacggcgaccagatggccgtgcacgtgccgctgtcgctggaagcgcagctggaagcg
cgcgcgctgatgatgtccaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacgtggtgctgggcctgtactacatgagccgcgccctggagaacaag
aagggcgagggcatggtgttcgccaacatcgccgaagtgaagcgcgcctacgacaaccgt
gcggtcgaactgcacgccaaggtcaaggtccgcatcaccgagacggtgatcgacgaggac
ggcaaccgcagcaagaagacctcgatcgtggacaccacgatcgggcgcgcgctgctggcc
gaaatcctgccggaaggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atcagccgcctgatcaactccagctaccgccagctgggcctgaaggacagcgtcgtgttc
gccgacaagctgatgtacaccggcttcgcctacgcgacccgcgccggcgtgtcgatcggc
atcgacgacatgctgatcccgtcggagaagaagggcatcctcggcgaagccgagcaggaa
gtgctggaaatccaggagcagtaccagtccggcctggtcaccgccggcgagcgctacaac
aaggtcgtggacatctggtcgcgcaccaacgagcgcatcgccaaggcgatgatggacacc
atcggcaccgagaaggtggtcaacgccaagggcgagaccatcgaccagaagtcgatgaac
tcgctgtacatcatggccgactccggtgcgcgtggtagccaggcgcagatccgtcagctg
gccggcatgcgcggcctgatggcgcgtccggacggctcgatcatcgagaccccgatcaag
gccaacttccgcgaaggcctgaacgtgcaggagtacttcaactccacccacggcgcgcgc
aagggcctggccgataccgcgctgaagaccgcgaactcgggttacctgacccgccgcctg
gtcgacgtggcgcaggacgtggtgatcaccgagccggattgcggcaccaccgacggcctg
accatgaccccgatcgtggaaggcggcgacgtggtcgagcccttgcgcgaccgcgtgctc
ggccgcgtggtggccgaggacgtgttcctgccgggcaacgacgaggatccgatcgtcacc
cgcaacacgctgctcgacgagcagtgggtggccaagctggaagaggccggcgtgcagacg
ctgaaggtgcgctccacgatcacctgcgaatcctcgttcggcgtgtgcgcccgctgctac
ggccgcgacctggcgcgcggccacctggtcaacatcggcgaggcggtcggcgtcatcgcc
gcgcagtcgatcggcgagccgggtacccagctgaccatgcgtaccttccacatcggcggc
gcggcctcgcgtgcggcggcggtggacaacatcacggtcaagaccaccggttcgatcaag
ttcaacaacctcaagtcggtcgagcacgccaacggttcgctggtggcggtgtcgcgttcg
ggcgaactgtcggtgctcgacggccacggccgcgagcgcgagcgctacaagctggcctac
ggcgcaacgatcaccgcgaaggacggcgatgcggtcaaggccggccagtcggtggccaac
tgggatccgcataaccacccgatcgtgtcggaagtggccggtttcatccgcttcatcgac
ttcatcgacggcgtcaccgtcatcgagaagaccgacgacctgaccggcctggcctcgcgc
gagatcaccgatccgaagcgtcgcggcacccaggccaaggacctgcgcccgatcgtgcgc
atcgtcgacggcaagggcaacgacctgaccatcccgggcaccgacctgccggcgcagtac
ctgctgccgccgcgctcgatcgtcaacctgcaggacggcgccgcggtcggcgtgggcgac
gtggtcgccaagatcccgcaggaagcgtccaagacccgcgacatcaccggcggtctgccg
cgcgtggccgacctgttcgaggcgcgcaagccgaaggatccggcgatcctggccgagcgc
tcgggcatcatcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
accgatggttcggaacacgaagagctgatcccgaagtaccgccagatcatcgtgttcgaa
ggcgagcacgtggccaagggcgagaccgtggtcgacggcgagccgagcccgcaggacatc
ctgcgcctgctcggcgtggagccgctggccgcgtacctggtcaaggaaatccaggacgtg
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtcatcacccggcagatg
ctgcgcaaggtcgagatcaccgaccagggcaacagcaagttcctcaacggcgagcaggcc
gagcgccagcgcgtcatcgaggaaaatgcccgcctggccacccgcaacgagctgccggcc
aagtacgacccggtgctgctgggcatcaccaaggcctcgctggccaccgagtcgttcatc
tcggcggcctcgttccaggagaccacccgcgtcctcaccgaggcggcggtgcgcggcacc
agcgacacgctgcgcggcctgaaggaaaacgtgatcgtcggccgcctgatcccggccggc
accggcctggcctaccacagcctgcgccgtcgcaactccagcggcctgaccgagtcggag
atgcagaccctgtccggcggcaacgccgagccggcggtcgaaacgcccgcaccggcggct
gccagcagcgaagagtga |
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