Xanthomonas bundabergensis: AB3X10_18170
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Entry
AB3X10_18170 CDS
T10887
Symbol
lptD
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
xbn Xanthomonas bundabergensis
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbn02000
]
AB3X10_18170 (lptD)
Transporters [BR:
xbn02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3X10_18170 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
Porin_7
LptD_N
Motif
Other DBs
NCBI-ProteinID:
XEA90067
LinkDB
All DBs
Position
4266619..4268964
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AA seq
781 aa
AA seq
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MRRALRLLPLPFSIALCLPAMAAEKPPNWGLCPTPDVLPKFDDAPKVDPKMAAIRDQQPT
NIEGDKLSGTTTVPNYTGNVALKRGDQFMGTDSLRVDTETGNYIAEGHVRYQDSSIRMVA
DRAEGNQDTDTHKITNIRYQLIERRGNGKADSVDLQGALGQMHRSTYTTCDPSQRVWELH
APEIDVDNDEGFGTARNAILKIYNVPILYAPWFKFPIDDRRTSGFLFPAIGFSGRNGFDY
MQPYYLNLAPNYDATLYPRYMSSRGFMFGSEFRYLYEGGKGEIQATYMPDDQLRDKDRGK
FEYQGYHNIDAHWQARASVAWVSDERYTEDFSNRLLGNSVSNLQSTVGVYGTGETWTAGL
MADRWQLTDYTLTESSLPYNRQPRAFFNWDQSFGNYFEAGIYSEAVRFVHDDVHAKDALY
ERTGVTTEMPGGSRLDLKPYISMPLAGAAWFLKPTLAWRYTAYQLDKDLAATLGGDTSPS
RSLPIATVDAGVYFDRDAKFGGTNYLQTLEPRLFYLYTPYRNQDDLPIFDTREFTFSWGQ
LFRDSRYTGADRQNDANQLTMALSSRLLRQDDGKEKLSVSLGQILYFSDSRVSLPDSDTT
IEQGKSAWVADANYMINDRWTMGATYQWDPKYRRKDLASFRTRYLLPGDGIINVSYRFRR
DLLEQTDVSVLYPINPTWSLVGRHYYSLEDKKPLEIIAGVQWDSCCLAVRALARRYVRNR
EGDLDTALQVEFVLKGLSSLGQDTDRVLRRAILGYNRDDLYLVPPSNTTTDPDAYDPNLI
P
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgagccctccgcctgctaccccttccgttcagtatcgccctctgcctgccggcg
atggcggccgagaagccgcccaactggggcctgtgcccgaccccggacgtgctgcccaag
ttcgacgacgcgcccaaggtcgacccgaagatggcggcgatccgcgaccagcagccgacc
aacatcgaaggcgacaagctgtccggcaccaccactgtcccgaactacaccggcaacgtc
gcgctcaagcgcggcgaccagttcatgggcaccgacagcctgcgcgtggacacggagacc
ggcaattacatcgccgagggtcacgtgcgctaccaggactcgtcgatccgcatggtcgcc
gaccgcgccgagggcaaccaggacaccgacacccacaagatcaccaacatccgctaccag
ctgatcgagcgccgcggcaacggcaaggccgactcggtcgacctgcagggcgcgctgggg
cagatgcaccgctccacctacaccacctgcgatccctcgcagcgggtgtgggaactgcac
gcgcctgagatcgacgtcgacaacgacgagggcttcggcaccgcgcgcaacgcgatcctg
aagatctacaacgtgccgatcctgtacgcgccgtggttcaagttcccgatcgacgatcgc
cggaccagcggcttcctgttcccggcgatcggcttctccgggcgcaacggcttcgactac
atgcagccgtactacctgaacctggcaccgaactacgacgccaccctgtatccgcgctac
atgagctcgcgcggcttcatgttcggcagcgagttccgctacctgtacgagggcggcaag
ggcgagatccaggcgacctacatgcccgacgaccagttgcgcgacaaggaccgcggcaag
ttcgaataccagggttaccacaacatcgatgcgcactggcaggcgcgcgcctcggtcgcc
tgggtcagcgacgagcgctacacggaagacttctccaaccgcctgctcggcaactcggta
tccaacctgcagagcacggtcggcgtctacggcaccggcgagacctggaccgccgggttg
atggccgaccgctggcagctgaccgactacaccctgaccgagtcctcgctgccgtacaac
cgccagccgcgcgccttcttcaactgggaccagtccttcggcaactatttcgaggccggc
atctacagcgaagcggtgcgcttcgtgcacgacgacgtgcatgccaaggacgcgctgtac
gagcggaccggggtgaccaccgaaatgcccggcggcagccgcctggatctcaagccctac
atctcgatgccgctggccggcgccgcctggttcctgaaaccgaccctggcctggcgctac
accgcctaccagctggacaaggacctggcggcgacgctgggcggcgacacctcgccctcg
cgcagcctgccgatcgccacggtcgatgccggcgtgtacttcgaccgcgacgccaagttc
ggcggcaccaactacctgcagaccctggaaccgcggctgttctacctgtacacgccgtac
cgcaaccaggacgacctgccgatcttcgatacgcgcgaattcaccttcagctggggccag
ctgttccgcgattcgcgctacaccggcgccgatcgccagaacgacgccaaccagctgacc
atggcgctgagttcgcgcctgctgcgccaggacgacggcaaagagaagctgtcggtcagc
ctcggccagatcctgtacttcagcgactccagggtcagcctgcccgacagcgacaccacc
atcgagcagggcaagtcggcgtgggtcgccgacgccaactacatgatcaacgaccgctgg
acgatgggcgccacctaccagtgggatcccaagtaccggcgcaaggacctggccagcttc
cgcacccgctacctgctgccgggcgacggcatcatcaacgtcagctaccgcttccgccgc
gacctgctggagcagaccgacgtgtcggtgctgtatccgatcaaccccacctggagcctg
gtcggccgccactactattcgctggaagacaagaagccgctggaaatcatcgccggcgtg
cagtgggacagctgctgcctggccgtgcgcgcgctggcgcggcgctacgtgcgcaaccgc
gaaggcgacctggacaccgcgctgcaggtcgagttcgtgctgaaggggctgtcctcgctt
ggccaggacacggaccgcgttctgcgccgtgctattctcggctataaccgcgacgacctg
tacttggtcccgcccagcaacaccacgaccgatccggacgcttacgatccgaacctgatt
ccatga
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