Xanthomonas bundabergensis: AB3X10_18680
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Entry
AB3X10_18680 CDS
T10887
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xbn Xanthomonas bundabergensis
Pathway
xbn00260
Glycine, serine and threonine metabolism
xbn00460
Cyanoamino acid metabolism
xbn00630
Glyoxylate and dicarboxylate metabolism
xbn00670
One carbon pool by folate
xbn00680
Methane metabolism
xbn01100
Metabolic pathways
xbn01110
Biosynthesis of secondary metabolites
xbn01120
Microbial metabolism in diverse environments
xbn01200
Carbon metabolism
xbn01230
Biosynthesis of amino acids
xbn01240
Biosynthesis of cofactors
xbn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB3X10_18680 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AB3X10_18680 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB3X10_18680 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AB3X10_18680 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB3X10_18680 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AB3X10_18680 (glyA)
Enzymes [BR:
xbn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AB3X10_18680 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Glyco_hydro_92
Motif
Other DBs
NCBI-ProteinID:
XEA90162
LinkDB
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Position
complement(4389402..4390655)
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AA seq
417 aa
AA seq
DB search
MFPRDARIETYDPELAQAIAAEAGRQEDHVELIASENYCSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRVKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNEQGLIDYDEVERLALEHKPKMVVAGFSAYSQK
IDWARFRAIADKVGAVLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIL
AKGASEDLVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKDYQQQVVKNAQAMAK
TLIARGYKIVSGGTENHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAITTRGYLEQDSVDLANWIADVLDAPADDAVIARVREAVTAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgcgacgcccgcatcgaaacctacgaccccgaactggcccaggccatcgcc
gccgaagccggccgccaggaggaccatgtcgagctgatcgccagcgagaactactgcagc
ccgcgggtgatggaagcccagggcagccagctgaccaacaagtacgccgagggctacccg
ggcaagcgctactacggcggctgcgaattcgtcgacatcgccgagcagctggcgatcgac
cgggtcaagcaattgttcggcgccgactatgccaatgtgcagccgcattcgggctcgcag
gccaaccaggcggtgtacttcgcgctgctgcagccaggcgacaccatcctgggcatgtcg
ctggcccacggcggccacctgacccacggcgccaaggtcaacgcttccggcaagctgttc
aacgcggtgcagtacggcgtgaacgagcagggcctgatcgactacgacgaagtcgagcgg
ctggcgctggagcacaagccgaagatggtggtggccgggttctcggcgtattcgcagaag
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggcgcggtgctgttcgtggac
atggcgcacgtggccgggctggtcgccgccggcgtgtatccgagcccgctggagcatgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaagggcgccagcgaggacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtgatcgcggccaaggcggtggcgttcaaggaagcgctg
gagccggagttcaaggactaccagcagcaggtggtgaagaacgcgcaggcgatggccaag
accctgatcgcgcgcggctacaagatcgtctccggcggcaccgagaaccacctgatgctg
gtggacatgatcggcaaggacgtgtccggcaaggacgcggaagcggcgctgggcaaggcc
cacatcaccgtcaacaagaactcggtgcccaacgacccgcgctcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggccatcaccacccgcggctacctggagcaggacagcgtc
gacctggccaactggatcgccgacgtgctcgacgccccggccgacgacgcggtcatcgcc
cgcgtgcgcgaggcggtgacggcgcagtgcaggaagtatccggtgtatggctga
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