Xanthomonas bundabergensis: AB3X10_22405
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Entry
AB3X10_22405 CDS
T10887
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xbn Xanthomonas bundabergensis
Pathway
xbn03420
Nucleotide excision repair
xbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3X10_22405 (uvrD)
03430 Mismatch repair
AB3X10_22405 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbn03400
]
AB3X10_22405 (uvrD)
Enzymes [BR:
xbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3X10_22405 (uvrD)
DNA repair and recombination proteins [BR:
xbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3X10_22405 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AB3X10_22405 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
InPase
Motif
Other DBs
NCBI-ProteinID:
XEA90865
LinkDB
All DBs
Position
complement(5267979..5270180)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAPSGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPVHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPESFQVLDSDDQL
RLVKRVVQQLELDEGKFPPKQIVWWINQQKDEGRRAQHIQPEPRDEWTTTLRSAYALYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRSRFGEILVDEFQDTNAIQYAFVRVLAGD
SGRVFVVGDDDQAIYGWRGAKVENVQRFLKDFPNAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEIDEARYVVERVRQWVRDGGSYSEAAVLYRSNAQ
SRAFEESLIAEQVPYRVYGGMRFFERAEIKDTLAYLRLVANRADDAAFERAVNTPTRGIG
DRTLDEVRRLARAQALSLWAAAQQAAQAGGDLAARARNALAQFLGLIEQLSAEVADLPLP
EQIDQVLARSALREHWSKESRGGLDSESRTDNLDELVSVASRFVRADNDADADEGRQAMT
ELVAFLSYASLEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRSASLGAPRNLGHSVIEAPAIRLGANVQHPKFGGGVVVDYEGNGAHARVQVQFDEVGA
KWLVMAYANLTVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctcccatttgctcgatgatctgaaccccgcccagcgcgaggccgtctccgca
ccgtccggccattacctggtcctggccggcgccgggtccggcaagacgcgcgtgctcacc
caccgcatcgcctggctcaacgaagtccacggcgtgccggtgcacggcatcttcgcggtc
accttcaccaacaaggcggccggcgagatgcgccaccgcaccgacctgcagttgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggcctggcgcaccgcctgctgcggctg
cactggcaggatgccaggctgccggagagcttccaggtgctggattcggacgaccagctg
cggctggtcaagcgcgtcgtgcagcagctggagctggacgagggcaagttcccgcccaag
cagatcgtgtggtggatcaaccagcagaaggacgagggccggcgtgcgcagcacatccag
cccgagccgcgcgacgagtggaccaccaccttgcgcagcgcctacgcgctgtaccaggag
cgctgcgaccgcgccggcctggtcgatttcgccgagttgttgctgcgcgcgcacgaactg
ctgcgcgacaacccggcgctgctggcgcactaccgcagccgcttcggcgagatcctggtc
gacgagttccaggacaccaacgcgatccagtacgcgttcgtgcgcgtgctcgccggcgac
agcggccgcgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggatttcccgaacgcgcagaccatccgcctg
gaacagaactaccgctccagcgccaacatcctcaacgccgccaacgcggtgatcgcccac
aacccggaccgcatcggcaagcagctgtggaccgattcgggcgacggcgacccgatcgac
ctgtacgcggcctacaacgagatcgacgaggcgcgctacgtggtcgagcgcgtgcgccag
tgggtgcgcgacggcggcagctacagcgaggcggcggtgctctaccgcagcaacgcgcag
tcgcgcgcgttcgaagaatcgctgatcgccgagcaggtgccgtaccgcgtctacggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacaccctggcctacctgcggctggtcgcc
aaccgcgccgacgatgcggcgttcgagcgcgcggtgaacacgcccacgcgcggcatcggc
gatcgcaccctggacgaggtgcggcgcctggcgcgcgcgcaggcgctgtcgttgtgggcc
gccgcgcagcaggcggcgcaagcgggcggcgacctggccgcgcgcgcgcgcaacgccctg
gcgcagttcctggggctgatcgagcaattgtccgccgaagtggccgacctgccgctgccc
gagcagatcgaccaggtgctggcgcgctcggcgctgcgcgagcactggagcaaggaaagc
cgcggcgggctggattcggaatcgcgcaccgacaacctcgacgagctggtctcggtcgcc
tcgcgcttcgtgcgcgccgacaacgacgccgacgccgacgaaggccgccaggcgatgacc
gagctggtcgcgttcctgtcctacgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaggacggcgtgcagctgatgaccctgcactcggccaagggcctggagttcccgctg
gtgttcctggccggcatggaagacggcctgttccccagcgcgcgttcgctggaagagagc
gggcgcctggaggaagagcggcgcctggcctacgtcggcatcacccgcgcgcggcacaag
ctggtgctcagctatgccgagtcgcggcgcatccacggccaggacaactacaacgtgccc
tcgcgcttcctgcgcgagatcccgcgcgagctgctgcacgaagtgcggccgaaggtgcag
gtctcgcgcagcgcctcgctgggcgcgccgcgcaatctcggccacagcgtcatcgaagcc
ccggcgatcaggctcggcgccaacgtgcagcaccccaagttcggcggcggcgtggtcgtc
gactacgaaggcaatggcgcgcacgcgcgcgtgcaggtgcagttcgacgaggtcggcgcg
aagtggctggtgatggcgtacgcgaatctgacggtgatctga
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