Xenorhabdus bovienii SS-2004: XBJ1_0042
Help
Entry
XBJ1_0042 CDS
T01186
Symbol
rbsR
Name
(GenBank) transcriptional repressor for ribose metabolism (GalR/LacI family)
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xbo03000
]
XBJ1_0042 (rbsR)
Transcription factors [BR:
xbo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
XBJ1_0042 (rbsR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_38
HTH_3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CBJ79197
UniProt:
D3UY19
LinkDB
All DBs
Position
46942..47934
Genome browser
AA seq
330 aa
AA seq
DB search
MKDVARLAGVSTSTVSYVINDNRYVSERVKKKVNAAIDELNYAPSALARSLKIKKTKTIG
MLVTTSNNPFYAEIVRGVERNCYERGYSLILCNTEGDVTRLIRSMETLLQKRVDGLLIMC
SENAILPNDFLLRYPLIPMVTMDWSPFYVSSDVIKDNSLLGGELATSYLISRGFRKIACI
AGPQDKTPARQRLAGYRKAMKDAQLEIPEGYEIHSDFEFAGGLSSMEQLLQLSKPPEAVF
AGNDAMAIGAYQALHRAGFSVPDDISVIGYDDISMAPYMTPPLTTIHQPKDELGKLAIDT
LLYRMGNPESEPKQLILKPKLIERNSVARR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgttgcccgtcttgcgggtgtatctacatcaacggtctcttatgtaattaac
gataaccgttatgtcagtgagagagtgaaaaagaaagtcaatgcggctattgatgagttg
aactatgcgccttccgctttggccagaagtctgaaaatcaagaaaaccaaaaccatcggt
atgctggtcacaaccagtaataacccgttttatgctgaaattgtcaggggagttgaacgg
aattgttacgagcgtggatacagcttaattctgtgtaataccgaaggtgacgtgacgcgg
ttgatccgcagtatggaaacactgttgcaaaaacgtgttgatggattgttaatcatgtgt
tctgaaaatgcgattctacccaatgactttctgctccgatatccacttataccgatggta
acaatggattggtcgcctttttatgtatccagtgatgtcatcaaagataactctctattg
gggggcgaattagccacaagttatctgattagccgaggttttcgtaaaatagcctgtatc
gctggcccacaggataagacgccagcccgtcagcgtctggctggatatcgaaaagcaatg
aaagatgcccagttagagatcccggaaggatatgaaatccacagtgattttgaatttgct
ggtggattgtcatcaatggaacagctactccaattatctaaacctcctgaggcggtattt
gcaggaaatgacgccatggctattggggcttatcaagccttacatagagcgggtttttct
gttcccgatgatatctccgtgattggatatgatgacatttcgatggcgccttacatgacc
ccaccactgaccaccattcatcaacccaaagatgaattgggtaagctggctattgatact
ctgctctatagaatgggcaatccggaaagtgagccaaaacaattaattttgaagccaaaa
ctgattgagcggaattctgtagccagacgctga
DBGET
integrated database retrieval system
