Xenorhabdus bovienii SS-2004: XBJ1_0512
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Entry
XBJ1_0512 CDS
T01186
Symbol
hemB
Name
(GenBank) 5-aminolevulinate dehydratase (porphobilinogen synthase)
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00860
Porphyrin metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01240
Biosynthesis of cofactors
Module
xbo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
xbo_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
XBJ1_0512 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xbo04147
]
XBJ1_0512 (hemB)
Enzymes [BR:
xbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
XBJ1_0512 (hemB)
Exosome [BR:
xbo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XBJ1_0512 (hemB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
CBJ79661
UniProt:
D3UZ79
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All DBs
Position
512739..513755
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AA seq
338 aa
AA seq
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MSYVFPGTFPGRRMRRVRRHDFSRRLVAENQLTVNDLIYPVFVMEGINQRQEVSSMPGVY
RLTIDLLLKEAEEIARLGIPVLSLFPAIEADKKSLDAQESYNPDGLIQRSIRALKNEVPE
LGLLTDVALDPFTTHGQDGVIDQDGYVINDITKEILVKQALSHAEAGAEIVAPSDMMDGR
IGAIRDQLEVDGYINTQIMAYSAKYASCYYGPFRDAIGSSGNLKGGNKMTYQMDPANSDE
ALQEIAQDLQEGADSVMVKPGMPYLDVIRRVKDTFGVPTFAYQVSGEYAMHVAAIQNGWL
KEQPAIMESLLCFKRAGADGVLTYFAKRVAQWLNEQKY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgtatttccaggtacgtttcctggtcgtcgtatgcgccgtgtacgtcgtcat
gatttttcccgccgtctggttgctgaaaatcaactcactgtcaatgatctgatttatccc
gtttttgttatggaagggattaatcaacgtcaagaagtgtcttctatgccaggagtgtat
cgtctgacaattgatcttttgctgaaggaagccgaagagattgcccgactgggtattcct
gttttgtctctgttcccagccattgaagcagacaaaaaatcactggatgcgcaggaatcc
tataaccctgatggtttgattcagcgctctattcgtgcattgaaaaatgaggttcctgag
ctgggattactgacagatgtggcactggacccatttaccacgcatggacaggatggtgtc
attgatcaggatgggtatgtcatcaatgatattaccaaagagattctggttaagcaggcg
ctatcccatgctgaagctggggctgaaatcgttgcaccgagcgatatgatggatggccgt
attggtgccattcgtgatcagcttgaggtcgatggctatatcaacacgcagattatggct
tactcagccaaatatgcctcttgttactatgggccattcagagatgcaattggctctagc
ggtaatttgaaaggcggcaataagatgacctatcagatggatccagcaaacagcgatgaa
gcgttgcaggaaattgcacaggatttgcaagaaggggcggatagcgtcatggtcaaacca
ggtatgccttatctggatgtgatccgtagggtgaaagatacttttggtgtgccaacattc
gcttatcaggtttctggtgaatatgcgatgcatgtggctgctatccaaaatggttggttg
aaagaacagccagccattatggaatcattgctgtgcttcaaacgtgcgggtgccgatggc
gtactgacttattttgccaagcgtgtagcacaatggttgaatgagcagaaatactga
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