Xenorhabdus bovienii SS-2004: XBJ1_0517
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Entry
XBJ1_0517 CDS
T01186
Symbol
fadB
Name
(GenBank) multifunctional: 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00071
Fatty acid degradation
xbo00280
Valine, leucine and isoleucine degradation
xbo00310
Lysine degradation
xbo00362
Benzoate degradation
xbo00380
Tryptophan metabolism
xbo00410
beta-Alanine metabolism
xbo00640
Propanoate metabolism
xbo00650
Butanoate metabolism
xbo00907
Pinene, camphor and geraniol degradation
xbo00930
Caprolactam degradation
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01200
Carbon metabolism
xbo01212
Fatty acid metabolism
Module
xbo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XBJ1_0517 (fadB)
00650 Butanoate metabolism
XBJ1_0517 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XBJ1_0517 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XBJ1_0517 (fadB)
00310 Lysine degradation
XBJ1_0517 (fadB)
00380 Tryptophan metabolism
XBJ1_0517 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XBJ1_0517 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XBJ1_0517 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XBJ1_0517 (fadB)
00930 Caprolactam degradation
XBJ1_0517 (fadB)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XBJ1_0517 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XBJ1_0517 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XBJ1_0517 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
XBJ1_0517 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
CBJ79666
UniProt:
D3UZ84
LinkDB
All DBs
Position
complement(518206..520392)
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AA seq
728 aa
AA seq
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MLYLSDTIQVNWLKDGIAELIFNAPAAINKLDTKTVASLDKAVAVLEQQTKLKGLLLRSE
KQAFIVGADITEFLSLFDAPKEKLQEWLKFANDIFSRIEDLPVPTISAINGYALGGGCEV
VLSTDFRVASPDLRIGLPETKLGIIPGFGGSVRLPRLIGPDNALEIITAGKDIGAEEALK
NGLIDAVVPTEKLVDAAVSILELAIKGDLDWQAARQPKLSPLNLNDVERTMSFTVAKGMV
MKVAGPHYPAPITAVKTIEKAATLGRDEALKLEAESFVPLAHTTVARALVGIFLNDQYVK
GLAKKHLKEVTVPQHATILGAGIMGGGIAYQSARKGVPVLMKDINQKALDLGVNEAAKLL
HKQFERGRLDAMKMAKILSSIQPTLSYAGIEQSQIVVEAVVENPKIKAAVLAETESHIND
DCILASNTSTIPITELAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVVGIDTAHHAQAVMAQGFPERMTRDYHDAIDVLFENQRYGQKNDVGFYKYTQDKKGKP
KKEQDETVDQLLAGISHPKQIFSGEDIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGVFRYLDTMGTAAYVKLAERYAHLGAMYHVPAGLKAKSESNESYYPAAAKI
AVNPGEKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctaagtgacactattcaagtaaactggctgaaagatggcattgcagaactg
atattcaatgcaccagctgcaattaataaattagatacaaagaccgttgcttcattggat
aaagctgttgccgtccttgagcaacaaactaaattaaaagggctgttgctacgttctgaa
aaacaagcctttattgttggtgcagacatcacagaattcttatcattattcgatgcacca
aaagaaaaacttcaggaatggctgaagttcgccaatgatattttcagccgtattgaagat
ctccctgttcctactatttctgcgatcaacggctatgcacttggcgggggttgtgaggta
gtgctgtcaactgactttcgtgttgcatccccagatcttcgcatcggattacccgaaact
aaattaggcattatcccgggctttggtggctctgttcgcctgccacgtttaattggccca
gataacgctctagaaattatcaccgcaggtaaagatattggtgctgaagaagcgttgaaa
aatggtctgattgacgccgttgtgccgactgaaaagctggtagatgctgctgtttctatt
ctggaactggccatcaaaggcgatctggattggcaagctgcccgccaacctaaactttcc
ccactgaacctcaatgatgttgaacgcaccatgagcttcaccgtggcgaaaggaatggtg
atgaaagtcgcaggtccacattatccagcgccaattactgctgtaaaaactattgaaaaa
gcagcgacattgggtcgcgatgaagccttgaaactagaagcagaaagttttgttccactg
gctcataccactgttgcccgtgccttggtcggcatcttcctgaatgaccaatatgtcaaa
ggtctggcgaaaaagcatctgaaagaagtcacagtgccacaacatgcaacgatactgggt
gcaggtattatgggtggtggtatcgcctatcaatctgcacgcaaaggcgttcctgttctg
atgaaagacattaatcagaaagcgctggatttaggtgtcaatgaagccgctaagttattg
cataagcaatttgagcgtggacgtctggatgctatgaaaatggctaagattctgtcatcc
attcagccaacactcagttatgcgggcattgagcaatctcagattgttgtcgaagccgtt
gttgagaacccgaagatcaaagctgcggtcttggcagaaacggaatcacatatcaacgat
gattgcattctagcctccaatacctccacgatcccaatcactgaattggcaaaatcattg
aaacgtccggaaaatttctgtggtatgcattttttcaatccagttcaccgtatgccgctg
gttgaaatcatccgtggagaaaaaacctcagacaagaccatttctactgttgtggcttac
gccagcaaaatgggaaaaacaccgattgttgtcaatgattgcccaggctttttcgtcaac
cgcgtattgtttccttatctggcaggcttcggcatgttactgcgtgatggcggtgatttc
cgtcaaatcgacaagatcatggagaaagagtttggctggcctatgggtcccgcgtatctc
atcgacgttgttggcattgataccgcccatcatgctcaagctgtcatggcacaaggtttt
ccagagcgtatgactcgcgattatcacgatgccattgatgtattatttgaaaatcagcgt
tacggccagaaaaatgacgtaggtttctataaatacacccaagacaaaaaaggcaagccg
aaaaaagagcaagatgaaaccgtcgatcaactgctggcaggtataagtcacccgaaacaa
attttctctggtgaagatatcattgcccgtaccatgatcccaatgattaacgaagtcgtt
cgctgcttggaagaaggtgtcattgccagtcctgcagaagcagatatggcgctggtttat
ggtttaggcttcccgccattccacggtggtgttttccgctatctggatacgatgggaacc
gcagcttatgtgaaactggctgaacgttatgcccacttaggcgcaatgtatcacgttccc
gctggcctgaaagcgaaatccgaaagcaatgaaagttactaccctgccgcagccaaaatt
gctgttaatccaggtgaaaaagcgtga
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