Xenorhabdus bovienii SS-2004: XBJ1_0556
Help
Entry
XBJ1_0556 CDS
T01186
Symbol
rpoH
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins
KO
K03089
RNA polymerase sigma-32 factor
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbo03021
]
XBJ1_0556 (rpoH)
Transcription machinery [BR:
xbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XBJ1_0556 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CBJ79700
UniProt:
D3UZB8
LinkDB
All DBs
Position
559498..560355
Genome browser
AA seq
285 aa
AA seq
DB search
MTKEMQTLALVPQGSLEGYVRASNAYPMLSAEEEKELAERLHYQGDLDAAKKLILSHLRF
VVHVARSYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVDLVAKELGVTSKDVREMESRMSAQDM
AFDMSSNDDSHDSQPVAPVLYLQDKASDFADGIEEDNWENHAADKLSMAIEGLDERSQDI
IRARWLDDDNKSTLQELADKYGVSAERVRQLEKNAMKKLRLAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaatgcaaactttggcactagttccacaaggtagtttggaaggatacgtc
cgtgcctccaatgcttatcctatgctctccgcagaagaagagaaagaactggcagaaagg
ctgcattaccagggagatctggatgcagcgaaaaagctgattctgtctcacttgcgcttc
gttgttcatgtcgctcgcagttattctggctatggtctgccacaggcggatttaattcag
gaaggcaacattggcctgatgaaagcggttcgtcgatttaatccagaagtaggcgttcgt
ctagtttcgtttgctgttcactggatcaaggcagaaatccatgaatatgtactgcgtaat
tggcgcattgtgaaagtcgcaacgacaaaagctcagcgtaaactgttttttaatttgcgt
aaggctaaacaacgtctggggtggtttaatcaggatgaagttgatttggttgccaaagaa
ttaggggtgaccagcaaggacgtccgagagatggaatcccgcatgtcggcgcaggatatg
gcgtttgatatgtcctctaatgatgacagtcatgacagccagccagtggctccggtgctc
tacttgcaggacaaggcttctgactttgccgatggtattgaagaagacaattgggaaaac
cacgctgcggataaactttctatggcgatagaagggctggatgagcgtagccaggacatt
atccgcgcccgttggctggatgatgacaacaaatccaccttgcaggaactggcggataag
tatggtgtatcggccgagcgtgttcgacagctagaaaagaacgcaatgaagaaattgcgg
ctggcgattgaagcgtaa
DBGET
integrated database retrieval system
