Xenorhabdus bovienii SS-2004: XBJ1_0654
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Entry
XBJ1_0654 CDS
T01186
Name
(GenBank) putative DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03030
DNA replication
xbo03430
Mismatch repair
xbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBJ1_0654
03430 Mismatch repair
XBJ1_0654
03440 Homologous recombination
XBJ1_0654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbo03032
]
XBJ1_0654
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_0654
Enzymes [BR:
xbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBJ1_0654
DNA replication proteins [BR:
xbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XBJ1_0654
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XBJ1_0654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CBJ79795
UniProt:
D3UZF2
LinkDB
All DBs
Position
complement(660625..661362)
Genome browser
AA seq
245 aa
AA seq
DB search
MGMRNRQQAQLIAEQILKEDIVILDTETTGLKSDDEIIEISIINADGNVLLDTLIKPQKK
IPPDATRIHRITNEDVQHKPLWSDVYKKYREIVEGKTVVIYNKSYDTKIIRQTCKKYELP
TPRIKSECAMLLYAKYEGIINKRTCEYKWHKLTDAIYKNNIQVTGEAHRALTDARMTLEL
LKFMACAEVNVSPRVHMNDSVHYKKNKPSNSIQPTKKKSNFQKIILKFFVVVIFFLMLNM
IWPLF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgcgaaatcgtcaacaagcgcagttaattgcagagcagatactaaaagaagat
attgttatattagatacagagacaacaggattaaaaagcgatgatgaaattattgaaata
agcattataaacgctgatggtaatgttttactagatacacttattaagccccaaaaaaag
atacctcctgatgcgacaagaatacacagaataacaaatgaagatgttcaacataagcca
ttatggagtgatgtctataaaaaatacagagagatagttgaagggaaaacagttgtcatt
tataacaaatcttatgatactaaaataattagacaaacatgcaaaaaatatgaattgcct
acgccaagaataaaatcagaatgcgcaatgttgttatacgctaagtatgaggggattata
aataaaagaacatgtgaatataaatggcataaactgacagatgcaatttataaaaataat
atccaagtcactggagaggctcaccgggcactcactgacgccagaatgaccctagaattg
ttaaagtttatggcttgcgcagaagtgaatgtatcaccaagagttcatatgaatgattct
gttcattacaaaaaaaacaagccatcaaattcaatccaacctaccaagaaaaaatctaac
tttcagaaaattattttgaaattcttcgttgtagtgatcttttttctcatgctcaatatg
atatggcctcttttttaa
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