Xenorhabdus bovienii SS-2004: XBJ1_0871
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Entry
XBJ1_0871 CDS
T01186
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00250
Alanine, aspartate and glutamate metabolism
xbo00310
Lysine degradation
xbo00350
Tyrosine metabolism
xbo00650
Butanoate metabolism
xbo00760
Nicotinate and nicotinamide metabolism
xbo01100
Metabolic pathways
xbo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XBJ1_0871 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XBJ1_0871 (gabD)
00310 Lysine degradation
XBJ1_0871 (gabD)
00350 Tyrosine metabolism
XBJ1_0871 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
XBJ1_0871 (gabD)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
XBJ1_0871 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
XBJ1_0871 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
XBJ1_0871 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
CBJ80012
UniProt:
D3UX27
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Position
882013..883497
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AA seq
494 aa
AA seq
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MTNHLETLLLRQQAYINGQWVDAHNKTTFAVINPANGEVIANVSDMGCAETQQAIEAAQT
ALPAWRALTAKQRSQKLKQWFHLIMDNQKSLAELLSAEQGKPHAEAMGEIAYGASFIEWF
AEEGKRIYGETIPSPMPGRRLATIKQPIGVVAAITPWNFPNAMITRKVGPALAAGCTVVL
KPAAETPLSALALAVLAEQAGIPAGVLNIVTGIDAKAIGETLTSSPIVRKLSFTGSTRVG
KLLMAQSADTVKKLSLELGGNAPFIVFDDADLDAAVEGAMATKFRNSGQTCVSANRILVQ
EGVYDAFAERLVHAVKQLRVGPTHSDSSQPVPQQGPLINQAAVEKIQAHISDAVSHGARI
LAGGKSHTLGGLFFEPTVLADVDDSMRVSHEETFGPLAPLIKFRDEAEAIRLANDTEFGL
AAYFYSRDIGRIYRVAEALESGMVGINEGLISNEVVPFGGIKQSGLGREGSRYGIEDYLE
VKYLCFGGLGTKGA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcatctagagacattactgctgcgccaacaggcttatatcaatggtcaatgg
gttgatgcgcataataaaacgacgtttgccgttatcaatcccgccaatggcgaagttatt
gccaatgtcagtgatatgggttgtgcagagacgcaacaagccattgaagccgcccagact
gcccttcccgcatggcgggcattgactgccaagcagcgcagccaaaagcttaagcaatgg
ttccatctaatcatggataaccaaaaatcgttagcggaactgctgagtgccgaacaggga
aaaccccatgcggaagcgatgggagaaattgcctatggtgccagttttatcgaatggttt
gcggaagaaggtaaacgcatttatggcgaaactatcccatcaccgatgccgggtcgtcgt
ctcgcgaccatcaaacagccgataggcgttgtagccgcgattacgccgtggaatttcccc
aatgccatgatcacccgtaaagttggcccggcactggccgcaggttgtacggttgtactg
aaacctgccgcagaaactccgctgtctgcgctggcattagcagtactggctgaacaggcg
ggcattccggcaggtgtcctgaatattgtcaccggtatagatgccaaagcaattggcgaa
acactgacttcaagccctatcgtacgcaaactctcttttaccggttctacccgtgttggc
aagttactgatggcgcaaagtgccgataccgtcaagaagctttctctcgaactgggcggc
aatgcgccttttattgtctttgatgatgcggatcttgatgcagctgtggaaggcgcgatg
gcgacgaaattccgcaacagcggacagacttgtgtcagtgccaaccggatcctggtacaa
gaaggcgtttatgatgcgtttgctgaacgtctggttcatgctgtcaaacaacttcgcgtc
gggccgactcatagcgattcatcacaacctgtgccacaacaagggccactgattaatcag
gcggctgtggaaaaaatacaggcacatatcagcgatgcggtttcccacggcgcgcgtatt
ctggccggcggcaagtcccacaccttgggtgggttattctttgaacccaccgtgctggcc
gatgtggatgattccatgcgggtcagccatgaagaaaccttcggcccactggcgccgctg
atcaaattccgcgatgaagcagaagccattcgcctcgccaatgatacagaatttggcctc
gcggcttatttctattcccgcgatattggccggatttaccgggtggcagaagcactggaa
agcggcatggtcggcatcaatgaaggtttgatttccaacgaagttgttccattcggaggc
ataaaacagtctggtctggggcgtgaaggttcacgttacggtatcgaagattatctagaa
gtgaaatatctctgttttgggggtttgggcactaaaggagcttaa
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