Xenorhabdus bovienii SS-2004: XBJ1_1059
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Entry
XBJ1_1059 CDS
T01186
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, catalytic and NAD/flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00020
Citrate cycle (TCA cycle)
xbo00190
Oxidative phosphorylation
xbo00650
Butanoate metabolism
xbo00720
Other carbon fixation pathways
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01200
Carbon metabolism
Module
xbo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xbo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xbo_M00149
Succinate dehydrogenase, prokaryotes
xbo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XBJ1_1059 (sdhA)
00650 Butanoate metabolism
XBJ1_1059 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
XBJ1_1059 (sdhA)
00720 Other carbon fixation pathways
XBJ1_1059 (sdhA)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XBJ1_1059 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
FAD_oxidored
Thi4
FAD_binding_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CBJ80200
UniProt:
D3UX88
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All DBs
Position
complement(1052676..1054442)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDNGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNNTTVFSEWYSLDLVKNQDGAIVGC
TAICIETGEIVYFKSKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHAKLKLDHLGKDVLETRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKITGQALTVNEKGEDVIIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGLHLK
ECLMEQGTSRDASESDVDAALQRLNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
AKGLEELKVIRERLQNARLDDTSSEFNTQRIECLELDNLMETAYSTAVSANYRTESRGAH
SRFDYPERDDANWLCHSLYLPRTESMTRREVNMQPTLREAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgccagtaagagagtttgacgcggttgttattggtgcgggtggcgcaggtatg
cgtgctgcactgcaaatttcacaaatgggtttatcttgtgccttgatctccaaggtattc
ccaacccgttcacataccgtttcagcacagggcggaattacggttgctctgggcaatacc
catgaggataactgggaatggcatatgtatgacacggtgaaaggctccgattatatcggt
gaccaggatgccattgagtacatgtgtaaaactggccctgaagccattctggaattggaa
cacatggggctgccattttcccgtctggataatggtcgtatttatcaacgtccatttggt
gggcaatccaagaattttggtggcgagcaggctgcccgcactgctgctgctgctgaccgt
acgggtcacgctttgttacacactctgtatcagcaaaacctgaaaaataacacgacggtt
ttctctgaatggtattcactggatctcgtcaaaaatcaggatggtgctatcgttggttgt
actgccatctgtattgaaacgggcgaaatcgtctatttcaaatccaaggcaaccattctg
gcaactggtggcgctggtcgtatttaccaatccacaaccaatgctcatatcaatactggt
gatggtgttggtatggcgctgcgtgccggcgttcctgtacaagatatggaaatgtggcaa
ttccacccaacgggtattgcgggtgccggcgttctggtaacagagggctgccgtggtgaa
ggtggttatctgctgaataaagatggtgaacgcttcatggagcgttacgcacccaatgct
aaagatctggcaggtcgtgatgtggttgcacgttccatcatgatcgaaatccgtgaaggc
cgtggctgtgaaggtccttggggacctcatgcgaaactgaaactggatcatctggggaaa
gacgtattggaaacccgtctgccgggcattcttgaattatcccgtacctttgctcacgtt
gatccggtgaaagagccgatcccggttattccaacctgtcactatatgatgggagggatt
ccaaccaagatcacgggtcaagcgctgactgtcaacgaaaaaggtgaagatgtcatcatt
ccaggcttgttcgctgtaggtgaaattgcctgtgtatctgtccacggagcaaaccgtctg
gggggtaactcattgctcgacctggtggtattcggccgttctgctggcttgcacctgaaa
gagtgcctgatggagcagggaaccagccgtgacgccagtgagtctgatgttgatgcagca
ctacaacgcctgaaccgctggaataatacccgttctggtgaagatccggttgaaatccgt
aaggcactgcaagcgtgcatgcaaaacaacttctcggtcttccgtgaaggtgatgcgatg
gcaaaagggctggaagagctgaaagtgattcgtgaacgtctgcaaaatgcccgtctggat
gatacttcatcagaattcaatacccagcgcatcgaatgtctggaactggacaacctgatg
gaaaccgcatactcgaccgcagtgtctgcgaattatcgtacagaaagccgtggtgctcac
agtcgttttgactacccagagcgtgacgatgcgaactggctgtgccatagcttgtattta
ccgcgaactgagagcatgactcggcgtgaagtaaacatgcagcctacgctgcgtgaagct
ttcccgccgaaagtgcgttcttactaa
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