Xenorhabdus bovienii SS-2004: XBJ1_1092
Help
Entry
XBJ1_1092 CDS
T01186
Name
(GenBank) RTX toxin ABC transporter (IM-ABC) protein RtxB
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XBJ1_1092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbo02000
]
XBJ1_1092
02044 Secretion system [BR:
xbo02044
]
XBJ1_1092
Transporters [BR:
xbo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XBJ1_1092
Secretion system [BR:
xbo02044
]
Type I secretion system
RTX toxin transporter
XBJ1_1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
DUF87
AAA_29
AAA_18
nSTAND3
DUF5906
ABC_ATPase
TMEM208_SND2
AAA
Motif
Other DBs
NCBI-ProteinID:
CBJ80233
UniProt:
D3UXC1
LinkDB
All DBs
Position
1100559..1102616
Genome browser
AA seq
685 aa
AA seq
DB search
MISNGKPIIIPDKNINNNDDYLFTLNKLKKEHHVSIKNKRSVNKKLNTLSLPAILFDDNG
HPFILAKHDEQRVLIQKPNQEAPEILDKESFIRLWSGRWIKIKQKSNQFNIRWFIPEFIR
QRKNLTEILLFSFILQILALISPLVVQVVMDKVLVHQALSTLDVLIFGLVAASLIEVVLR
GLREYQYAHTANRIDIKLGLKLVRHLLGLPLLFFKSRQVGAIVTRVRELETVREFLTGSM
FTLCIDVLFMFVFIYVMSLLSGTLTLLFLATIPFYGLLAWWVTPKIEKAVEKQFIHAAIN
TSFLTETVAGAETLKSLAAEPRFIRRWDSQTENMVSTSYDVQQWDNRSSHLVMLLQKVTS
AVIIWLGASEVLSLHMTIGQLIAFNMMVSHTQQPLAKLVQLWGQFIRSRIAIDKLGDMLN
LPTEQQSGKERVSLQGAISFSDIVFRYQPDLSPTINRFTLDIRAGETLGVVGTSGSGKST
LARLLLRLYTPEHGTITLDGIPLQEFNIESLRQQIGIVLQENFLFNKTVHENIAQSRPDA
PLSDIIEAARLAGAHDFILKLPMGYDTIIAEGGQSLSGGQRQRLAIARTLLSDPTILILD
EATSALDDESQSIIQSNMADIAQGRTVITIAHRLSTVRQCDRIIVLHQGQIIEQGSHEQL
LQQGKQYRKLWQLQQELKQEVTSHV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatatctaatggtaaacccattatcatacccgataaaaacataaataataatgatgat
tatctttttactttaaataaattaaagaaagaacatcatgtttccattaaaaataaacgt
tcagtaaataagaagttaaacacattatctttacccgctattctgttcgatgataatggg
catccctttattttagcaaaacatgatgagcaacgagtattgattcaaaaacctaatcag
gaagcgcctgaaatattggataaagaaagctttatccgtttatggagcggacgctggata
aaaataaaacaaaaaagtaaccaattcaatatccgttggtttattcccgaatttatccgg
caaaggaagaatctgactgaaattctgctgttttcgttcattttgcaaattttagcgttg
atttctcctttggtcgtgcaggttgtcatggacaaggtactggttcatcaggcgttatcc
accttagatgtgttgatttttggtctggtggctgcaagcctgattgaagtggttctacgt
gggctacgcgaatatcagtatgcccatacagccaatcgcattgatatcaaactgggctta
aaactggttcggcacctacttggcctgcctttgctgtttttcaaatcccgccaagtggga
gcaattgtgacgcgggtacgtgaactcgaaaccgtacgggagtttttaaccggttccatg
ttcaccctgtgtattgatgtcctgtttatgttcgtattcatttacgtgatgagcctgcta
tccggcacactgactttgctgtttttggctaccatccctttctatggtctgctggcatgg
tgggtcacgcccaaaatcgagaaagcagtcgaaaagcaattcattcatgctgcgatcaat
acctctttcctgaccgaaaccgtcgccggtgccgagacactgaaaagcctggcagcggaa
ccccgctttatccggcgctgggatagccagaccgagaatatggtgagtaccagttatgat
gtgcagcaatgggataaccgctccagccatcttgtgatgctgttacaaaaagtcaccagt
gcggtcattatctggcttggtgcctccgaagtactctccctgcacatgaccatcggccag
ttgatcgcgttcaatatgatggtcagccatacccagcaacccctggccaagttggtgcaa
ctctgggggcaatttatccgctcacgtattgccattgataaactgggggatatgttgaat
ctgccgacagaacagcagtcaggcaaagagcgagtctcattgcagggtgctatttcattc
tctgatatcgtatttcgctatcagcccgatctctccccaaccatcaaccgttttacgctg
gatatccgggcaggagaaacgcttggcgtagtaggaacatccggttctggaaaaagtacc
ctcgcgcgcctgttacttcggctttataccccggaacatggcaccatcacactggatggc
attccattgcaggagttcaatattgaatctctgagacagcaaataggcatcgtgttacaa
gaaaattttctgtttaataaaaccgtacatgaaaacattgcccaatcacgacccgatgct
cctctgtctgatattattgaagcggccagactggcgggggcacacgattttattctcaag
ctgccgatggggtacgacactatcatcgcggaaggcggccaatccctctccggcgggcag
cgacagcgtctggccattgccagaaccctgctgtctgatcccaccattctgatccttgat
gaagccaccagcgcactggatgatgagtcacaatcgattattcaatccaatatggcggac
attgcgcagggcagaacggtcattaccatcgcccatcgactctccacggtacgccagtgc
gaccgaatcattgtactgcaccaaggtcaaattattgaacaaggtagccatgaacaactg
ctacaacagggcaagcagtatcgaaaactctggcaattgcaacaggaactgaaacaggag
gtgacttcccatgtttaa
DBGET
integrated database retrieval system
