Xenorhabdus bovienii SS-2004: XBJ1_1343
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Entry
XBJ1_1343 CDS
T01186
Symbol
prpR
Name
(GenBank) transcriptional activator of propionate catabolism (EBP family)
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xbo03000
]
XBJ1_1343 (prpR)
Transcription factors [BR:
xbo03000
]
Prokaryotic type
Helix-turn-helix
Other families
XBJ1_1343 (prpR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA
HTH_psq
RWP-RK
Xre-like-HTH
HTH_Tnp_ISL3
AAA_2
HTH_23
HTH_17
HTH_30
MLD
HTH_11
HTH_1
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CBJ80476
UniProt:
D3UXV1
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Position
complement(1314927..1316582)
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AA seq
551 aa
AA seq
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MASGYTGERDNNKPVIWTVSVSRLFDLFRDITPEFDHQADITPINLGFEQAVQHIRKRLE
TEHCDAVICAGSNGAYLKSRLSVPVIIAKSSGFDFMQALARARQISARIGVITYQNTLPA
LEEFQQRFNLRIEQRSYVTEEDARTQVNALKAIGIKVIVGAGLITDLAYEAELVGVFLYS
ADTIRQAFHDALEMARMTKLNLGGSSPYPTEDKLRIRHTLNDIIGDSAVVEHVRNTIMLY
ARSTATVLIQGESGTGKELVAQAIHHEYSLRYGQSVGKHPRPFVAVNCGAITESLLEAEL
FGYEEGAFTGSRRGGRAGLFEIAHRGTLFLDEIGEMPLPLQTRLLRVLEEKSVVRVGGYR
PIAVDVRIICATHCDLDTWVREGRFRTDLFYRLSVLRINVPALRERGSDIGLLAVEYLRR
AFAALNLPVSSSKIRELSACHAALQSYHWPGNVRELRNLMERIALYLSAHPEQALTPALI
LSLSPERQIDISSVKSNAKTFEIEPPSSMAVSSSVHDIVARFAGNRQAAAEYLGISRTTL
WRRLKQEPEKD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggatatacaggggagcgtgataacaacaaaccggtgatctggacagtatcg
gtttcccggctttttgacctttttcgtgacatcacgccggaatttgatcatcaggctgat
atcacaccgattaatcttggttttgaacaggcggttcagcatattcgtaaacgtctggaa
acagagcactgtgatgccgtgatttgtgccggctcgaatggcgcctatctaaaaagtcgt
ttatccgtaccagtgattatcgccaaatccagtggttttgatttcatgcaggcactggca
cgagcgaggcaaatcagcgcccggattggcgtcatcacttatcagaataccctgccagca
ttggaagaatttcagcagcgtttcaacttgcggattgaacagcgcagctatgtgacggaa
gaagatgccagaacgcaggttaatgcgctgaaagccatcggtatcaaggtcattgtgggg
gcagggctgattaccgatctggcttatgaagccgagctggtgggggtgtttctctattct
gccgacactatccggcaggcatttcatgatgcgttggaaatggccagaatgactaagctc
aatctgggggggagttcgccttatcctacggaggataagttgcgcattcgtcatacgctt
aacgatattataggtgattctgctgtggtagagcatgtacgcaacacgattatgctgtat
gcccgctcgacggccacagtgttgattcaaggggaaagtggtacgggaaaagagctggtg
gcacaggcgattcatcatgaatacagcctgcgttatgggcagtctgtgggtaaacatccg
cgtccctttgttgcggtcaactgtggtgccattaccgagtcattactggaggcagagctg
tttggctatgaagaaggcgcttttacaggctcccgacgagggggacgggcgggtttgttt
gaaattgcgcacagaggaacgttgtttctggatgaaataggcgaaatgccattgccactg
caaacgcggttattgagagtgctggaggagaaatccgtcgtcagggtcgggggatatcgt
ccgattgcggttgatgttcggatcatttgtgccactcattgtgatttagatacgtgggtg
cgagaagggcgttttcggacagatctcttctaccgcttgagtgtgctgagaattaatgtg
ccagcattacgtgaaagagggagtgatattgggctactggccgtggagtatctgcggcgg
gcatttgcggcgcttaacttgcctgtttcatcgtcaaaaatacgggaactttctgcttgt
catgcagcgctgcaatcttaccattggccgggtaatgtgcgggaactgcgtaatttgatg
gagaggattgcactatacttaagtgcccatcccgaacaggcattgacacctgctttgatc
ttatcgctttcacctgagcggcagattgatatcagttcggtgaagagcaacgcgaaaact
ttcgagattgaacctccttcttcaatggcagtttcttcctctgtccatgatattgtggcg
agatttgcgggtaatcgacaggcggcggcagaatatctgggaattagccgcacgacgtta
tggcgaaggttaaagcaagaaccggagaaagattaa
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