Xenorhabdus bovienii SS-2004: XBJ1_1634
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Entry
XBJ1_1634 CDS
T01186
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation
KO
K03530
DNA-binding protein HU-beta
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbo03032
]
XBJ1_1634 (hupB)
03036 Chromosome and associated proteins [BR:
xbo03036
]
XBJ1_1634 (hupB)
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_1634 (hupB)
DNA replication proteins [BR:
xbo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XBJ1_1634 (hupB)
Chromosome and associated proteins [BR:
xbo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XBJ1_1634 (hupB)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XBJ1_1634 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CBJ80760
UniProt:
D3V0C7
LinkDB
All DBs
Position
complement(1597573..1597863)
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AA seq
96 aa
AA seq
DB search
MGMIRVNKSQLIDKIAADVNISKAAAGRVVDAFISSVSDALKDGDDVVLVGFGTFTVRER
AARTGRNPQTGKEIKIAAAKVPAFRAGKGLKDAVNE
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggggatgataagagtgaacaagtcacaactgatcgacaaaattgctgctgatgtaaat
atttccaaagcagctgccgggcgtgtagtagatgcattcatttcttcagtatctgatgca
ttgaaagacggtgatgatgtcgttttggtagggttcggtacttttactgtacgtgaacgt
gcagctcgtacagggcgtaacccccagacaggcaaagaaatcaaaatcgcagcagcaaaa
gtacccgctttccgcgcaggaaagggattgaaagatgctgttaatgagtaa
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