Xenorhabdus bovienii SS-2004: XBJ1_1720
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Entry
XBJ1_1720 CDS
T01186
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00220
Arginine biosynthesis
xbo00240
Pyrimidine metabolism
xbo00250
Alanine, aspartate and glutamate metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01240
Biosynthesis of cofactors
Module
xbo_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
XBJ1_1720 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XBJ1_1720 (carB)
00220 Arginine biosynthesis
XBJ1_1720 (carB)
Enzymes [BR:
xbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
XBJ1_1720 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
CBJ80846
UniProt:
D3V281
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All DBs
Position
complement(1681137..1684361)
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AA seq
1074 aa
AA seq
DB search
MAKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELERQGVLTEFSVTMIGATA
DAIDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEALAVAEDVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIICSIENFDPM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGVTGFDPKVNLDDPQS
LTKIRSELKSAGAERIWYVADAFRAGMSIDGVFNLTNIDRWFLVQIEELVRLEEQVEEQG
INGLTFDFLRHLKRKGFADAHLAKLVGVSGKEIRKLRHDYNLYPVYKRVDTCAAEFSTDT
AYMYSTYEDECESNPNHDKPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPTGVIVQYGGQTPLKLARELEAAGVP
IIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVSTIEQAVEKGNGLGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQNAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVEKLAFELRVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGLPLAKVAARVMAGQSLLKQGVTKEIIPPYYSVKEVVLPFNKF
LGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSSSTMGKHGRALLSVREEDKERVVDL
AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYNYIVNTTAGR
QAIEDSKLLRRSALQYKVHYDTTLNGGFATTMALSADPTEQVISVQEMHAKITG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtactgatattaaaagtatcctgatcttgggtgcgggtccgattgttatc
ggtcaggcttgtgaatttgactattccggcgctcaggcttgtaaagcgttgcgggaagaa
ggctatcgcgtcattctggtgaactccaaccctgcaaccatcatgaccgatccggaaatg
gcggatgcgacctatatcgagccaatccattgggaagtggtacgcaaaattattgaaaaa
gagcgtccagacgcaattttgccaaccatgggcgggcaaactgccctgaactgtgcactg
gaactggaacgtcagggcgtactgacagaatttagcgtgaccatgattggtgcaaccgct
gacgcgattgataaagcagaagatcgtcagcgttttgacaaagcgatgaaaaaaatcggg
ctggatactgcgcgttctggtatcgcccacacgatggaagaagcgctggcagtggcagaa
gacgttggcttcccttgtatcattcgtccttctttcactatgggcggaagcggcggcggt
attgcttataaccgtgaagaatttgaagaaatctgtgagcgcggtctggatctttcccca
accaacgaattattgatcgatgaatcattgattggctggaaagagtatgaaatggaagtg
gtgcgggataaaaatgacaactgtatcatcatctgttcgattgaaaatttcgatccaatg
ggtatccatacgggtgactctatcaccgtagcgccagcacaaacactgactgacaaagaa
taccagatcatgcgtaacgcttcgatggcggtactgcgtgagattggtgtagaaactggc
ggctcgaacgttcaattttcagtgaacccgaaaaatggtcgtttgattgtgattgagatg
aacccacgcgtatctcgttcatctgcgctggcttccaaggcgacgggcttcccgatcgca
aaaattgcggcaaaactggcagtgggttatacccttgatgaattaatgaatgacatcacg
ggtggccgtacaccggcatctttcgagccttctatcgattatgtcgttaccaagatcccg
cgtttcaactttgaaaaatttgctggcagcaatgaccgcctgacaactcagatgaagtct
gtcggtgaagtgatggcgattggccgtactttccaggaatccatgcagaaagcgctgcgt
ggtctggaggtcggcgtgaccgggttcgatcctaaagtcaatctggatgatccacagtca
ctgaccaagatccgcagcgaattgaaaagcgctggcgctgaacgcatctggtatgtcgcc
gatgctttccgcgcgggtatgtctattgatggcgttttcaacctgactaacattgatcgc
tggttcttggtacagattgaagaactggtgcgtttggaagagcaggtggaagaacagggc
attaatggcctgacgtttgatttcctgcgtcatcttaagcgcaaaggctttgcggatgca
catttggcgaaactggtcggcgtatctggcaaagagatccgcaaattacgtcacgattac
aacttgtatccggtttataaacgtgttgatacttgtgcggcagaattttcgaccgatacc
gcttacatgtactccacgtatgaagacgaatgtgaatccaacccgaaccatgacaagccg
aagatcatggtattgggtggtggcccgaaccgtatcgggcaaggcattgaatttgattac
tgctgtgtacatgcgtcactggcactgcgtgaagacggttacgaaaccatcatggtgaac
tgtaacccagaaactgtttcaacggattacgacacttccgaccgtctctattttgaaccc
gtgacactggaagacgtgctggaaatcgtccgtgttgaaaagccaaccggtgtgatcgtc
cagtatggcggccagacgccattgaaactggcgcgtgagttggaagcggccggtgtgccg
attatcggcaccagcccggatgctattgaccgtgcagaagaccgtgaacgtttccagcag
gctgtcaatcgtctcggtttgaaacaacctgcgaacgctaccgtctccaccatcgaacag
gcggttgagaaaggtaatgggcttggctatccgctggtggttcgtccatcttacgtgctg
ggtggacgtgcgatggaaattgtctatgacgaaactgacctgcgtcgttacttccagaat
gcagtcagcgtatccaatgacgctcccgtattgctggatcgcttccttgatgatgcggtt
gaagtcgatgttgatgctatctgtgatggtgagcgtgtcttgattggcggtatcatggag
catatcgaacaggcaggggttcactccggcgactcagcgtgttcactaccagcttacacg
ttgagtcaggaaattcaggacgtgatgcgccagcaagttgaaaaactggcttttgaattg
cgtgtccgtggtctgatgaacgtgcagtttgcagtgaaaaataacgaagtgtacctgatt
gaagtgaacccgcgtgcggcacgtaccgttccttttgtttccaaagcgaccggtctgccg
ttggcaaaagtagctgcacgggtgatggcgggtcaatctctgctgaaacagggcgtcact
aaggaaattattcctccgtactactctgtaaaagaagtggttctgccgttcaataaattt
ctgggtgttgaccccattttgggaccggaaatgcgttctacaggtgaagttatgggtgtt
ggccgcactttcgctgaagccttctccaaagcgatgctgggcagtagctccacgatgggc
aagcacggccgtgccctgttgtctgtacgtgaagaagataaagagcgcgttgttgatttg
gccgctaaactgctcaaacagggctttgaactggatgcgacccacggtacagcgattgtg
ttgggtgaggcggggatcaacccacgtctggtgaacaaagttcatgaagggcgtccgcat
attcaggatagaatcaaaaacggtgaatataactatatcgttaataccaccgcaggccgt
caggccattgaagattcaaaactgctgcgtcgtagcgcactgcaatataaagtgcattat
gacaccaccctgaatggtggttttgcgactaccatggcactcagtgcagatcccactgag
caggtgatttctgtacaggaaatgcacgcaaaaatcacaggataa
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