Xenorhabdus bovienii SS-2004: XBJ1_1796
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Entry
XBJ1_1796 CDS
T01186
Symbol
hepA
Name
(GenBank) ATPase associated with RNA polymerase and transcriptional activator
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbo03021
]
XBJ1_1796 (hepA)
Transcription machinery [BR:
xbo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
XBJ1_1796 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Spc24
Motif
Other DBs
NCBI-ProteinID:
CBJ80922
UniProt:
D3V2F7
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All DBs
Position
1751375..1754284
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AA seq
969 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVALDTRMVTLLFPASGENRLYARNDSPITRVMFNAGDT
LTSHEGWKLKVDEVQQDNGLLIYIGTRLDTEEENITLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKHQSEQFRLAESGLRGIRASLIPHQLHIANEVGKRHAPRVLLADEVG
LGKTIEAGMVIHQQLMAGRAERVLVIVPESLQHQWLVEMLRRFNLRFSLFDDGRYSEALH
DSDNPFETEQLIICSLDFVRRNKQRFEHLLEASWDLMVVDEAHHLEWSEKAPSREYQVIE
ELAEQIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYQAFIDEQQTYRPVADAVTLLL
SGETLNNDQQNLIVELISEQDIEPLLKAANSHQDEESEKSRRELIAMLMDRHGTSRLLFR
NTRSGVKGFPHRELHEIKLPLPAQYQTAIKVSEIMGAKKSVEARAKDMLYPERIYQEFEG
ENATWWNFDPRVEWLLGFLLANRDEKVLVICAKAETALQLEQVLREREGIRSAVFHEGLS
LLERDRAAAYFASEDEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDR
IGQSRNIKISIPYLENTAQSILLRWYHEGLNAFEQTCPTGRPIYDKYYETLVNFLAKPNE
QAGFTPFIAECREHHEQLRQELEQGRDRLLEMNSNGGEQGQKLAETIAAQDNDTDLVSFA
LNLFDIIGINQEDRSDNIITLNPSDHMLVPDFPGLPADGCSITFDREKALSREDTQFLSW
EHPIIRNGLDLILSGDTGSCAVSILKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPT
PVRLLMDLKGTNLAPQVEFESFNRQLNAINRHNASKLVSAVQKEVHAILQQSEPLVEQQA
REVIEKAKKEADNVLSAELSRLEALKAVNPNIRDDELEAVDSEHKHLLLNLDQANWRLDA
IRLVVVSHQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccatttacccttggtcaacgctggataagcgatacagaaagcgaacttggattagga
acagtcgtagcgcttgatacgcgcatggtgacgttacttttccctgccagcggagaaaac
cgcctttacgcacgcaatgattcacccattacccgcgttatgtttaatgcgggcgatacc
ctgaccagtcatgaaggctggaaactcaaggtcgatgaagttcagcaagataatggcctg
ttaatctatatcggtactcgtctggatactgaagaggaaaatatcaccctgcgagaagtt
tttctggatagtaagctgacgtttaataagccccaggatcgtctgtttgccggtcagatt
gaccgaatggatcgctttgcgctgcgtttccgcgcccgtaaacatcaaagtgagcaattt
cgtctggctgaaagtgggctgcgtggcattcgcgccagcttaatccctcaccagttgcat
attgccaatgaagtcggcaaacgccacgctccccgtgtgctgctggccgacgaagtcgga
ttaggtaaaaccatcgaagctggcatggttattcaccagcaactcatggccggtcgtgct
gaacgtgtgctggtcatcgtgccggaaagcctccagcaccaatggctggtagaaatgcta
cgccgtttcaacctgcgcttttccctgtttgatgatggtcgttattccgaagccctgcac
gatagcgataatccatttgaaacagagcagttgattatctgttctctggattttgttcgc
cgtaataaacagcgttttgaacatctgctggaagcgagctgggatttaatggtcgtcgat
gaggctcatcatctggaatggagcgaaaaagcaccaagtcgcgaatatcaggtcattgaa
gagttagccgagcagatcccatccgtgctgctgctgacagcaacacccgagcaattagga
caggaaagccattttgcccgtctgcgtctgctcgatcccaatcgtttccacgattatcag
gcgtttattgatgaacagcagacgtaccgtccggtcgctgatgccgtcaccctgctgctg
tctggcgaaacactgaacaatgaccagcagaacctgattgtcgaactgattagcgagcag
gatattgaacctttgctgaaagcggcaaacagtcatcaggatgaagagagtgaaaagtcc
cgccgtgaactgatcgctatgttgatggatcgccacggtaccagccgcctgctgttccgt
aatacccgcagcggcgtcaaaggctttccacaccgtgaactgcacgaaatcaagctacca
ttacccgctcaatatcagacggcaatcaaagtgtctgaaatcatgggtgccaaaaaatcc
gtagaagcgcgcgctaaggatatgctctacccggagcggatctatcaggagtttgagggc
gaaaatgcgacatggtggaacttcgatccccgtgtggaatggctgcttggttttctgctg
gcaaaccgtgatgaaaaagtgctggtgatctgtgccaaggcagaaactgccctgcaactg
gagcaggtgctacgcgaacgtgaaggtatccgcagtgccgtgttccacgaagggttatct
ctgttagaacgcgaccgtgccgcagcttatttcgcttccgaagatgaaggagcgcaagtg
ctgctctgttctgaaattggttctgaagggcgtaacttccagtttgctaaccagcttgtc
atgtttgatctgcctttcaacccagatttgctggaacaacgcattggtcgcttagatcgt
atcggccaaagccggaatatcaagatcagcataccttatctggaaaataccgcgcaatcg
attctcctgcgctggtatcacgaaggtctgaatgcctttgaacagacctgcccaaccggt
cgccccatctatgacaaatattatgaaactctggtgaatttccttgccaagccaaacgaa
caggctggcttcacgccattcattgctgagtgtcgtgagcatcatgagcaactcaggcag
gagctggagcaaggccgtgaccgtctgctggaaatgaattccaatggtggcgagcaggga
caaaagctggcagaaaccatcgccgcacaggataacgatacagatctggtgagttttgct
ctgaatttgttcgatatcattggcattaatcaggaagatcgcagcgacaatattattacc
ctgaatccatccgatcatatgctggtgccggatttccctggcttaccggcagacggttgc
tcaattacgtttgatcgtgaaaaagccttgtcccgcgaagatacccaattcctgagctgg
gaacacccgatcatccgtaacggcttagatctgattttgtctggagataccggaagctgt
gccgtttccattctgaaaaacaaagcactgccagtcggaacgctgttggttgagttaatt
tacgttgttgaagcccaagcgccgaaacacctgcaattaacccgcttcctgccaccaaca
ccagtgcgcctcttaatggatctgaaaggaaccaatctggcacctcaagtggaatttgaa
agtttcaaccgccagctaaatgccatcaatcgccataatgccagtaaactggtcagcgcg
gtgcaaaaagaagttcacgctattttgcagcaatctgaaccgctggtggaacaacaagcc
cgtgaggtgattgaaaaagcgaaaaaagaggcagataacgtgctgtctgctgagttgtca
cggctggaagcgctgaaagcggttaacccaaatatccgtgatgatgagctggaagcggtt
gactctgaacataagcatctgctgctcaatcttgatcaggcaaattggcgtctggatgcc
attcgcctggtggtggtctctcatcaataa
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