Xenorhabdus bovienii SS-2004: XBJ1_1996
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Entry
XBJ1_1996 CDS
T01186
Symbol
fliA
Name
(GenBank) sigma F (sigma 28) factor of RNA polymerase, transcription of late flagellar genes (class 3a and 3b operons)
KO
K02405
RNA polymerase sigma factor FliA
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo02020
Two-component system
xbo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XBJ1_1996 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XBJ1_1996 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbo03021
]
XBJ1_1996 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xbo02035
]
XBJ1_1996 (fliA)
Transcription machinery [BR:
xbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XBJ1_1996 (fliA)
Bacterial motility proteins [BR:
xbo02035
]
Flagellar system
Flagellar assembly proteins
Stator
XBJ1_1996 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
TFIIE_alpha
GerE
Tweety
Motif
Other DBs
NCBI-ProteinID:
CBJ81122
UniProt:
D3V307
LinkDB
All DBs
Position
1983792..1984514
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AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERFD
SLQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVTQTIRKLEQELGRPASEQEV
AKELKINLIEYRQILLDTNNSQLFSYDEWHEIHGESCEPVIEDEHETNPLQQLLEGDLRQ
RVIDVIESLPEREKMVLTLYYQEELNLKEIGAVLNVGESRVSQLHSQAIKRLRARLNPEK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatttgtataccgccgaaggcgtgatggacaaaaatagcctctggaagcgctat
gtaccactagttcgccatgaagcattgaggctacaggtgaggctgcctgccagcgtggag
cttgatgatctgcttcaggctggtggtataggcttactgaatgcggtggagcgttttgat
tccttgcagggaaccgcgtttaccacctatgcggtacagcgcatcagaggtgcaatgttg
gatgagttgaggagccgtgattgggctccgcgtagtgtgcggcgtaatgcacgtgaagtc
acgcagaccatccgtaaacttgagcaagagttaggccgtccagctagtgagcaggaagtt
gctaaagaattaaagattaatctgatagaatatcggcaaatactgttagacacaaataac
agtcaactgttttcttatgacgagtggcacgaaattcatggcgaaagctgtgagccggta
attgaggacgagcatgagacaaatcctctccaacaattgctggaaggtgatcttcgtcag
cgggttatcgatgtcattgagtcgctgcctgaacgggaaaaaatggttctgacgctgtac
tatcaggaagaactgaatcttaaagagattggcgcagtacttaatgtgggagaatcccgc
gtgagtcagcttcacagccaggcaataaaacggctgagggcgcgtttgaatccagaaaag
taa
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