KEGG   Xenorhabdus bovienii SS-2004: XBJ1_2237
Entry
XBJ1_2237         CDS       T01186                                 
Symbol
yoaA
Name
(GenBank) putative ATP-dependent helicase with nucleotide triphosphate hydrolase domain, SOS repair
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
xbo  Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xbo03400]
    XBJ1_2237 (yoaA)
Enzymes [BR:xbo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     XBJ1_2237 (yoaA)
DNA repair and recombination proteins [BR:xbo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    XBJ1_2237 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: CBJ81363
UniProt: D3V213
LinkDB
Position
2219576..2221492
AA seq 638 aa
MSDDFAKNGVLAKAIQGFNPRDAQREMASSITAAIKKQRQLVVEAGTGTGKTFAYLVPAL
RSGKKVIISTGSKALQDQLYNRDLPTVADALKFTGRMALLKGRSNYLCLERLEQQSFGSS
QLEPEMLAEVVRLRSWSSQTEDGDISTCHQIAEDSIVWPLVTSTNDNCLGSDCPRYQECF
VLKARRKAMESDIVVVNHHLFMADMVVKDTGFGELIPRADVVIFDEAHQLPDIASQYFGQ
QLSSRQLMDLSRDIIMAYRTEVRDQAQLQKSADRLSQSTQDFRLSLGDNSYRGNLREALQ
QPQIQRMLVRLDDALELCYDVMKLSLGRSAMLDAAFERATIYRNRLKRLIDVVVPNYSYW
FESYGRHFLLALTPLSVSDKFSDMIREQSGCWIFTSATLSVNEQLDHFTARLGLKQAQTL
LLPSPFDYQRQMLLCVPRHLPSPNQNGGAKWLARMLKPLIESNKGRCFFLCTSHQMVRGL
AEEFRANLTLPVLVQGETSKGQLLSQFISAGNALLVATGSFWEGVDVRGDALSCVIIDKL
PFTAPDDPLLKARIEDCQLKGGDAFSEVQIPDAVLSLKQGVGRLIRDIDDYGVVIICDNR
LVMRPYGEIFLNSLPPARRTRDLSKAVEFLKSRPIESE
NT seq 1917 nt   +upstreamnt  +downstreamnt
gtgtcagacgattttgcgaaaaatggcgtacttgccaaggcgatacaaggtttcaacccc
cgtgatgcacagcgggaaatggcttcatccattaccgctgcaataaaaaaacagcggcaa
ttagtggtggaagcgggaacgggaacgggtaagacttttgcctatctggtgccagcacta
cgttcaggcaaaaaagtaattatttccacaggttccaaggcgttacaggatcagctttat
aaccgtgacctgcccactgtcgctgatgcattgaagtttacgggtaggatggccttattg
aaagggcgctcaaattatctatgccttgagcgtcttgaacagcaatcatttggcagttct
cagcttgagccggaaatgctggcagaagtggtcaggctgagaagttggtcgtctcagaca
gaagatggcgatatcagtacttgccaccaaatcgcagaagacagcattgtctggccattg
gtaacaagtactaatgacaattgcctcggtagtgattgtccacgctatcaggaatgtttc
gtactgaaagcccgccgcaaagcgatggaatcggatattgttgtcgttaaccatcatctg
tttatggcggacatggtggtgaaagataccggatttggcgaattaatccctcgtgcagat
gtagtcattttcgatgaggcacaccagcttcccgatattgccagccaatattttggccag
caattgagtagtcgccaactgatggatttatcacgagatatcattatggcctaccgtact
gaagtacgggatcaggctcaattgcagaaaagtgcggatcgtctcagtcaaagtacgcag
gatttccgtctgtccttgggagataacagttatcggggcaatctccgtgaagccttgcag
cagccacagatacagcggatgctggtacggttggatgatgcactggaactctgttatgac
gtaatgaagctctctctggggcgctcggccatgttggatgctgcttttgaacgggcaacg
atctatcgtaatcgtcttaaaaggctgatcgacgttgttgtacccaattatagttattgg
ttcgaaagttatggacggcattttttgctggcactaacacccctatccgtatccgataaa
ttcagtgacatgatccgtgaacaatccggttgctggattttcacgtccgcaaccttatct
gtcaatgaacagcttgaccacttcacggcacgcttggggttaaaacaagcacagacgttg
ctcctgcccagccccttcgattatcagcgccagatgttactgtgtgttccgcgccattta
ccatcaccaaaccagaatggcggggcaaaatggctggcacgtatgctgaaaccattaatt
gaaagcaataaggggcgttgtttttttctttgtacttcccatcagatggtgcgcggtctg
gcggaggaattccgtgctaacctgacattgcccgtgttggtgcaaggagaaacaagtaaa
ggacagctgttgtcccagtttatttctgcgggtaatgcgctactggtggcgacgggtagt
ttttgggagggtgtggatgttcgtggtgatgcattgtcctgtgtcattattgataaactg
ccgttcaccgcgccggatgatccgctgctcaaggcacggattgaagattgccagcttaaa
ggcggggatgcctttagtgaagtccagattcctgatgcagtgctcagcctgaaacaaggt
gtaggacgcctgattcgtgatattgatgattatggcgtggttattatttgtgataatcgt
ttagtaatgcgcccatatggtgaaatttttcttaacagcttaccgcctgcccgccgtaca
cgtgatttatcgaaagcggtggaattccttaaatcacgtccaatagagtcagagtaa

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