Xenorhabdus bovienii SS-2004: XBJ1_2420
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Entry
XBJ1_2420 CDS
T01186
Symbol
oppD
Name
(GenBank) oligopeptide transport protein (ABC superfamily, atp_bind)
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo01501
beta-Lactam resistance
xbo02010
ABC transporters
xbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XBJ1_2420 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XBJ1_2420 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XBJ1_2420 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbo02000
]
XBJ1_2420 (oppD)
Transporters [BR:
xbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
XBJ1_2420 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ABC_ATPase
Formyl_trans_C_2
TniB
AAA_29
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBJ81546
UniProt:
D3V1K2
LinkDB
All DBs
Position
complement(2396787..2397794)
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AA seq
335 aa
AA seq
DB search
MNSVEAAKNAKSAVPLLTVKDLNVAFSTPDGSVIAVNKLNFDLNAGETLGIVGESGSGKS
QTAFALMGLLASNGVVSGSAAFNGREILNLKEKDLNRMRAEEISMIFQDPMTSLNPYMRV
GEQLTEVLMLHKRISKSEAVEESIRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMAL
LCQPKLLIADEPTTALDVTVQAQIMTLLNELKNEFNTAIILITHDLGVVAGICDKVLVMY
AGRTMEYGSARDIFYHPTHPYSIGLLDAVPRLDDDEESLTTIQGNPPNLLRLPKGCPFQP
RCQFATERCANEEPQLEHFDLGRLRACFKPQGELV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtagaagctgcaaaaaatgctaaaagtgctgtgccactattaacggtgaaa
gatctgaatgtcgcgttcagcacacccgatggcagtgtgatagccgtaaataaactgaac
tttgatttaaacgcgggagaaacgctgggcatagtgggagaatccggctccggtaaatca
cagactgcttttgccctgatgggattattagccagtaatggtgttgtgagtggttctgct
gcttttaatggaagagaaatactcaacctgaaagaaaaagatctgaaccgaatgcgggcg
gaagagatctcaatgatatttcaagatccaatgacttcccttaatccttatatgcgagtg
ggtgaacagctaactgaagtcttgatgttgcataagcgtatcagtaaaagtgaagctgtc
gaagaatccattcgtatgctggatgctgtcaaaatgccagaagcgcgtaagcggatgaaa
atgtacccgcatgaattctccggtggtatgcgtcaacgtgtcatgattgcaatggcatta
ttatgccagcccaagctgttgattgcggatgaaccgacaacagcactggatgtcactgtt
caggctcagatcatgacactgctcaacgagctgaaaaatgaatttaatacggccattatc
ctgattacccatgacctgggtgtcgttgcaggtatctgtgacaaagtactggttatgtat
gcgggcagaaccatggaatatggttctgcgcgtgatatattttatcacccgacccatcca
tactcgattgggttacttgatgcggttcctcgactggatgacgatgaggaatcattgacg
actattcagggcaacccacctaacttactgagactgccaaaagggtgcccattccagccg
cgttgtcaatttgccactgagcgttgtgccaacgaagagccacagttggaacattttgat
cttgggcgcttgcgtgcctgctttaaacctcagggggaattggtatga
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