Xenorhabdus bovienii SS-2004: XBJ1_2442
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Entry
XBJ1_2442 CDS
T01186
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XBJ1_2442 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_2442 (xthA)
Enzymes [BR:
xbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XBJ1_2442 (xthA)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XBJ1_2442 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
CBJ81566
UniProt:
D3V1M2
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All DBs
Position
2418773..2419579
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AA seq
268 aa
AA seq
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MKFVSFNINGLRARPHQLAAIVEQHQPDVIGLQETKVHDEMFPLEEVSKLGYHIFYHGQK
SHYGVALLTRQQPVTVRKGFPTDDDDAQRRIIMADIETPQGLMTIINGYFPQGESREHPV
KFPAKEKFYQDLNRYLEKNQSPDSHILIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFL
PEEREWMGRLKDWGLIDTFRAQHPEASDQFSWFDYRSKGFDDNRGLRIDLLLASRPLAER
CLSSGIDYAIRSMEKPSDHAPVWAEFGI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcattcaatattaatggcctgcgggcgcgtcctcaccaacttgctgcc
atcgttgaacagcaccaaccagatgttatcggattgcaggaaacaaaagttcatgatgaa
atgtttcctttagaagaagttagcaaacttggttaccacatcttctatcacggccaaaaa
tcccactacggtgttgccctgctcacccgtcagcaacccgttactgttcgtaaaggcttt
cctactgatgatgatgacgcacagaggcgcatcatcatggctgatatcgaaacgccgcaa
ggcttaatgaccataatcaacggttactttcctcaaggcgaaagccgtgaacatccggtt
aagtttccagcaaaagaaaaattttatcaggacctgaatcgctatctggaaaaaaaccaa
tctccagattcacatattctcattatgggtgatatgaatatcagcccaactgatctcgat
attgggatcggagaaaataaccagaaacgctggttaaaaacggggaagtgttccttttta
ccggaagaaagagaatggatgggacgtcttaaagactggggcttaatcgacacattccgg
gcacagcatccagaagccagtgaccagttctcttggtttgactatcgctcaaaagggttt
gatgataatcgagggctgcgcattgatttgctgcttgccagccgcccattggcagaacgg
tgcctctcttctggcatagattacgctatccgcagcatggaaaaaccatctgatcatgca
ccggtctgggcggagtttggaatatag
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