Xenorhabdus bovienii SS-2004: XBJ1_2965
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Entry
XBJ1_2965 CDS
T01186
Symbol
truA
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbo03016
]
XBJ1_2965 (truA)
Enzymes [BR:
xbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XBJ1_2965 (truA)
Transfer RNA biogenesis [BR:
xbo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XBJ1_2965 (truA)
Prokaryotic type
XBJ1_2965 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CBJ82089
UniProt:
D3V8C7
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All DBs
Position
complement(2926805..2927644)
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AA seq
279 aa
AA seq
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MSDAELSQSVPEAEKVKIALGIEYDGSRYYGWQRQQEVKSVQECLEKALSKVADEPISVF
CAGRTDAGVHATGQVVHFKTSAQRKDAAWTMGVNSHLPPDIAVRWVKTVDDEFHARFSAT
ARRYRYIIFNHRYRPAVLAQGVTHFHYLLDERKMHEAAQSLLGENDFTSFRAVQCQSNSP
WRNMMHINVSRHGHYVVVDIKANAFVHHMVRNIVGSLLEIGCSNQDIGWMAELLALKDRT
KAAATAKAEGLYLVAVDYPEHFGLPAPTMGPLFLANDLI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcagagctgagtcagtctgtaccagaggcagaaaaagtgaaaattgcactg
gggattgaatatgatggcagccgctattatggttggcagcgccagcaagaagtaaaaagt
gtgcaggaatgtctggaaaaagctttgtcaaaagtggcagatgaaccgatttcggttttc
tgtgcaggcagaacggatgcgggggtacatgctactgggcaggtagtgcattttaaaacc
tcagcacaacgtaaagatgctgcctggacaatgggagtcaatagtcatttgccacccgat
atcgcagtgcgctgggtaaaaacggtggatgatgaatttcatgcccgtttcagtgcaacg
gcacgtcgttatcgatatataatctttaaccatcgctatcgccctgcggtgttagcacag
ggcgtcacgcattttcactatctactcgatgagagaaaaatgcatgaagcggcgcagagt
ttactgggagagaatgactttacttctttcagggcagtacagtgccaatctaattcaccg
tggcgcaatatgatgcacattaatgtcagtcggcacgggcattatgtggtggtggacatt
aaagcgaatgcatttgttcatcacatggtacgtaatattgttggcagtttgctggaaatt
ggttgtagtaatcaggatatcggctggatggctgaactactggcactgaaagacagaaca
aaagcggcggcaacagccaaagctgagggattatatttagttgcggtggattatcctgag
cactttggtttacctgcacccactatggggccgttgtttctagctaatgatttaatctga
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