Xenorhabdus bovienii SS-2004: XBJ1_3037
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Entry
XBJ1_3037 CDS
T01186
Symbol
yfhA
Name
(GenBank) putative response regulator in two-component regulatory system (EBP family)
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo02020
Two-component system
xbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XBJ1_3037 (yfhA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XBJ1_3037 (yfhA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xbo02022
]
XBJ1_3037 (yfhA)
Two-component system [BR:
xbo02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
XBJ1_3037 (yfhA)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_2
HTH_8
AAA
Mg_chelatase
AAA_16
MCM
PDE8A_N
AAA_3
TIP49
UPF0175
ATP-grasp_4
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CBJ82161
UniProt:
D3V8J9
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Position
complement(2999306..3000643)
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AA seq
445 aa
AA seq
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MTVRNPARLLLVDDDPGLLKLLGMRLTSEGFRVTTAESGHEALRLLAKEKVDLVISDLRM
DEMDGMALFAEIQKQHPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDRDALYKAIDA
ALELSKPAIDGQWCEQIVTRSPLMLRLLEQAKMVAQSDVSVLINGQSGTGKEVLAQAIHR
VSPRVKKPFIAINCGALPEQLLESELFGHAKGAFTGAVSSREGLFLAAQGGTLFLDEIGD
MPLALQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMQRNEFREDLYYRLNV
VNMKIPALNERAEDIPLLANHLLRASAKRHKPFVRSFSTNAMKCLMAASWPGNVRQLVNV
IEQCVALTTAPVISDALVMQALEGENTALPTFVEARGQFELHYLRKLLQMTKGNVTHAAR
MAGRNRTEFYKLLARHELDANDFKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcgcaatcccgcccgtcttcttttagttgacgatgatccaggcttactaaaa
ctattgggaatgcgtctgaccagcgaagggtttcgtgtcacgacggcagagagtggtcat
gaagcgttgcgtctattggcgaaagaaaaagtggatttagtcatcagtgacttacgcatg
gatgagatggatggcatggcattgtttgcggaaatccagaagcagcatcccggtatgcca
gtgattattctgacggctcacggttctattcccgatgctgttgcggcgacacagcaaggt
gtatttagtttcttgactaaacccgttgatcgtgacgctctttataaagccattgatgct
gcgttggaactgtcaaaaccggccatagatgggcagtggtgcgaacagattgtaacgcga
agccccttgatgctgcgtttgctggaacaggcaaaaatggtcgctcaatcagatgtcagc
gtcctgattaatggacaaagcggaacgggtaaagaagtgttggctcaagctatccatcgg
gtaagccccagagtgaagaaaccttttattgcgatcaactgtggcgctttgcctgaacaa
ttgctggagtctgaattattcggccacgccaaaggcgcatttactggtgcggtcagcagt
cgggaagggctgtttctggcggcgcagggaggaacattattccttgatgaaatcggtgat
atgcctttggcactgcaagtcaaactattgagagttttacaggaacgcaaagttcgccca
ttggggagtaaccgtgatatagacatcgatgtcagaattatttccgccactcaccgtgac
ttacccaaggcgatgcagcgtaatgaattccgcgaagatctctactatcgactgaacgtc
gtcaacatgaaaattcctgccctgaacgaacgggctgaagatattcctttattggctaat
cacctgttacgtgcatctgccaaacgccataaaccttttgtccgcagtttttcgactaat
gcgatgaaatgtctgatggcagcgagctggccgggcaatgtacgtcagttggtcaacgtt
atcgagcagtgtgtcgcactgacgactgcaccggtgattagtgatgcactggtcatgcag
gcgctggaaggggaaaacacggcattgccgacatttgtggaggctcgtgggcaatttgag
ttgcactacctgcgtaaattgctgcaaatgaccaaaggcaacgtcacccatgctgcccgt
atggcaggacgtaaccggacggagttttataaattgctggctcgtcacgaattggatgcc
aacgattttaaggaataa
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