Xenorhabdus bovienii SS-2004: XBJ1_3075
Help
Entry
XBJ1_3075 CDS
T01186
Symbol
dnaQ
Name
(GenBank) DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03030
DNA replication
xbo03430
Mismatch repair
xbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBJ1_3075 (dnaQ)
03430 Mismatch repair
XBJ1_3075 (dnaQ)
03440 Homologous recombination
XBJ1_3075 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbo03032
]
XBJ1_3075 (dnaQ)
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_3075 (dnaQ)
Enzymes [BR:
xbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBJ1_3075 (dnaQ)
DNA replication proteins [BR:
xbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XBJ1_3075 (dnaQ)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XBJ1_3075 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CBJ82199
UniProt:
D3V8N7
LinkDB
All DBs
Position
3031063..3031812
Genome browser
AA seq
249 aa
AA seq
DB search
MSTAITRQIVLDTETTGMNKLGVHYEGHNIIEIGAVEVINRRLTGRHFHLYIKPERLVDP
EAFEVHGISDEFLQDKPTFADIADEFIEFIRGAELIIHNATFDIGFMDYEFRKLNRDIPP
TADFCTITDSLVLARQLFPGKRNNLNALCDRYQIDNSKRTLHGALLDAEILSDVYLTMTG
GQTSLTFSMEGEISGGAQMAEIQKITRPQTGLKVIYASDEELLQHESRLDLVEKKGGSCL
WRPKPEQLQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcaattacccgccaaattgtcctcgatacagaaacaaccggtatgaataag
ctgggtgttcactatgaaggacacaacattatcgaaattggagcggtagaagtgatcaac
cgtcgtctgacggggcgtcattttcatctctatattaaacctgagcgtctggttgatcct
gaagcgtttgaagttcacggtatcagtgacgaatttttgcaggataaaccaacgtttgcc
gatattgccgatgagttcatcgaatttatccggggcgccgagctgattattcacaacgcg
acgttcgatatcggctttatggactatgaattccgcaagcttaatcgtgatatcccgcca
accgcagatttttgtacgatcacggatagcttggtgctggcaaggcaattgttccccggc
aagcgaaataaccttaatgcgttgtgcgaccgttatcagatcgataactcgaagcgtact
ctccacggagccttgcttgatgctgagatcctgtctgatgtctatctgacaatgacaggt
ggccagacatcgctgaccttttcgatggaaggagagatctcaggtggcgctcagatggca
gaaatccagaaaattacgcgtccccagacgggattgaaagtgatctatgcttctgatgaa
gaattgcttcaacatgaatcccgcttggatctggttgaaaagaaaggtggaagctgtcta
tggcgtccgaaacctgaacaattacagtga
DBGET
integrated database retrieval system
