Xenorhabdus bovienii SS-2004: XBJ1_3197
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Entry
XBJ1_3197 CDS
T01186
Symbol
miaB
Name
(GenBank) involved in methylthiolation of isopentenylated A37 derivatives in tRNA, Fe-S protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbo03016
]
XBJ1_3197 (miaB)
Enzymes [BR:
xbo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
XBJ1_3197 (miaB)
Transfer RNA biogenesis [BR:
xbo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
XBJ1_3197 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Amdase
Motif
Other DBs
NCBI-ProteinID:
CBJ82318
UniProt:
D3V3T9
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All DBs
Position
3124356..3125786
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AA seq
476 aa
AA seq
DB search
MSTIKKLYIKTWGCQMNEYDSSKMADLLETTHGYQLTDVAEEADILLLNTCSIREKAQEK
VFHQLGRWKGLKDKNPEIIIGVGGCVASQEGDFIRQRAPSVDIIFGPQTLHRLPEMINHV
KGTHSPIVDISFPEIEKFDRMPEPRAEGPSAFVSIMEGCNKYCTFCVVPYTRGEEVSRPC
DDILFEIAQLAAQGVRDVNLLGQNVNAYRGAAFDGDICTFAELLRLVAAIDGIDRIRFTT
SHPIEFTDDIIAVYEDTPELVSYLHLPVQSGSDRILTQMKRAHTALEYKGIIRRLRKARP
DILISSDFIIGFPGETQDDFEKTMQLIADVNFDMSFSFIYSARPGTPAADLPDDVSEEEK
KQRLYLLQQRINQQAMSFSRAMVGSTQRILVEGTSRKNIMELSGRTENNRVVNFEGTPDM
IGKFVDAEIVDVYANSLRGKVIRTEDEMNLRIHESPESVIARTRKEDEIGVGIYQP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgataaaaaaactgtatatcaaaacctggggctgtcagatgaacgaatatgat
tcatccaagatggccgacttactggaaaccactcacggttatcagttaaccgatgtcgcc
gaagaagcagatatcttactcctgaacacctgttcaatccgtgaaaaagcccaagaaaaa
gtcttccatcagctcgggcgctggaagggtttaaaagacaaaaatcccgaaattattatt
ggtgtcggtggctgtgttgcatctcaggaaggggatttcatccgccaacgcgctcctagc
gttgatattatcttcgggcctcaaaccctgcatcgcctgcctgaaatgattaatcatgtg
aaaggcacccacagtccaatagttgatatcagcttccctgagatcgaaaaattcgaccga
atgccagaacctcgggcagaaggcccgagcgcattcgtctccattatggaaggctgcaat
aagtactgtacattctgcgtcgttccttacacccgaggagaagaagtcagccgtccttgt
gatgatattttgtttgaaattgcccagcttgctgctcaaggcgtacgtgacgttaacctg
ctcggtcagaacgttaacgcttaccgaggcgcagcattcgacggggatatctgcacattt
gcggaattactgcgtctggtcgcggccattgatggtattgaccgcattcgcttcaccacc
agccatcctattgaatttaccgatgatattatcgcggtttacgaagacacaccggagtta
gtcagctatctgcacctacccgtacagagtggctctgaccgtatcctgacccagatgaaa
cgtgcacataccgcactggaatacaaagggatcatccgccgtctgcgcaaagcacgtcct
gacattctgatcagttctgacttcatcatcggtttccctggtgaaacacaggatgacttc
gaaaaaaccatgcaactgattgccgatgtgaatttcgacatgagtttcagcttcatctat
tcagcgcgtccgggaacccctgcggccgatttgccggatgacgtgagtgaagaagaaaaa
aaacagcgcctgtatctgctccagcagcgtatcaatcagcaggccatgagcttcagccgc
gcaatggttggcagtacacagcgtattctggttgaaggcacatcccgcaaaaatatcatg
gagctttccggccgtactgaaaataaccgcgtggttaattttgaaggaacgcctgacatg
attggcaagttcgttgatgccgaaattgttgacgtgtatgccaactccctgcgcggtaaa
gttatccgtacagaagatgagatgaatttgcgcatccatgagtcacctgagtcagtcatc
gcccgtacccgcaaggaagatgaaatcggcgttggcatttatcagccttaa
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