Xenorhabdus bovienii SS-2004: XBJ1_3302
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Entry
XBJ1_3302 CDS
T01186
Symbol
dinB
Name
(GenBank) DNA polymerase IV, devoid of proofreading, damage-inducible protein P
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_3302 (dinB)
Enzymes [BR:
xbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBJ1_3302 (dinB)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
XBJ1_3302 (dinB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_HHH_1
IMS_C
IMS_HHH
HHH_5
Cdd1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
CBJ82420
UniProt:
D3V441
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All DBs
Position
complement(3226172..3227284)
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AA seq
370 aa
AA seq
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MKLYIYTVILVWKEACRGEMRKIIHIDMDCFFAAIEMRDNPSLRDIPIAVGGSADRRGVI
STANYPARLFGVRSAMSTAMALKLCPQLKVIPGRMASYKEVSQHIRQIFSRYTELIEPLS
LDEAYLDVTDCQHCHGSATLIAQQIRQVIFDELQLTASAGVAPIRFLAKIASDINKPNGQ
YVISPEQVEVFVKSLPLRKIPGVGKVTSKRLSDMGLETCADVQNYDKVALIKKLGKFGLA
LWERSHGIDDRQISPDRLRKSVGVEKTLAQDIHEWRDCVELIEKLYPELEKRLGKVKPDL
RIARQGIKLKFDDFQLTTQEHIHPLLDKSDLIQVAKQAWEIRREGRGVRLVGLHVTLQNP
QLERQLLLEW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatatttatacagttattttggtgtggaaagaggcatgcagaggtgaaatg
cgcaaaattattcatattgatatggactgcttttttgctgccattgaaatgcgggataat
ccatcactccgcgatatccccattgctgttggcggtagcgctgatagacgaggggtgatc
agcacggcaaattatcctgcccgcctttttggcgtacgcagtgctatgtccactgcaatg
gcattgaaactttgtcctcaattgaaagtcataccggggcgaatggcgtcctacaaagaa
gtttctcagcatatccgccagattttttcccgttacactgaactgattgaaccgctttca
ctggatgaagcctatttggatgtgacggactgtcaacattgccacggctcggcgacgttg
atcgcccaacagatccgtcaggtgatttttgatgaattgcaactgacagcctctgctggc
gttgcacctatcagatttctggcaaaaattgcgtctgatatcaataaacctaacgggcaa
tatgttatttcccctgaacaggttgaggtattcgtcaagtcattgccattacgcaaaatt
ccaggagtgggaaaagtcacatccaagcgtctatctgatatgggattggagacttgtgct
gatgtacaaaactatgacaaggttgcgttgattaaaaaattggggaaatttgggctggca
ctttgggagcgcagtcatggtattgatgaccggcaaatcagtcccgatcgcttacgtaag
tctgttggtgtagaaaaaacattggcacaggatattcatgagtggcgtgattgtgttgaa
ctcatcgaaaaactttacccagaattggaaaaacgtttaggcaaggtaaaacctgatctc
cgcattgcccgtcagggtatcaaattaaaatttgatgattttcaattgacgacacaggaa
catattcacccattattggataaatcggatctgattcaggtggcaaaacaggcttgggaa
attcgcagagaagggaggggcgtgcggttggttgggctgcatgtgacgttacagaatcct
caattggaacggcaattattactggagtggtaa
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