Xenorhabdus bovienii SS-2004: XBJ1_3331
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Entry
XBJ1_3331 CDS
T01186
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase, PLP-binding
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00300
Lysine biosynthesis
xbo00470
D-Amino acid metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XBJ1_3331 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XBJ1_3331 (lysA)
Enzymes [BR:
xbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XBJ1_3331 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CBJ82449
UniProt:
D3V470
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All DBs
Position
complement(3254540..3255823)
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AA seq
427 aa
AA seq
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MTISTLTGFSGEKFTPENLLRLPVDYGTPLWVYDSDIIIRKINRLKRFDIIRFAQKACSN
THILSLMRAQGVKVDAVSLGEIERALYAGYQPGRDRSEIVFTADLIDEITLNRVIELDIP
VNVGSIDMLEQIGTRQSGHPIWLRINPGFGHGHSQKTNTGGENSKHGIWFQDLPLAIEKV
RQYGLKLVGLHMHIGSGVDYQHLANVCNAMVEQVISCGEDIQAISAGGGLSIPYKTGDEI
VDTEHYYSLWHKARQRIERHLGHHVELEIEPGRFLVAESGILMAEVRAVKPMGSRHYVLV
DAGFNDLMRPTMYGSYHHISVLSVNSQHIDEAVSQDAELHETLVAGPLCESGDVFTQSAG
GDVVPRLLPRVCVGDYLIFHDTGAYGASMSSNYNSRPLIPEILFIEGDARLIRRRQTIEE
LLALEAV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatcaactttgactggtttttcaggcgaaaaatttactccagagaatctgctg
cgtttacccgttgattacggaacaccattatgggtttatgacagtgacattattatccga
aaaatcaatcgattaaagcggtttgatatcattcggtttgcacagaaagcctgctctaat
acccatatcctgagtttgatgagagcacagggagtaaaagtggatgcggtgtcattgggg
gaaattgaacgggcactttatgctggatatcagcccggccgtgatcgatccgaaattgtg
ttcactgcggatttgattgatgaaataacacttaatcgagtgattgagttggatattcca
gtcaatgtcggctccattgatatgctggagcagattggtacacgtcagtcgggtcatcct
atttggctacgcattaatccgggatttggtcatggtcatagtcagaaaaccaatacgggc
ggcgaaaacagcaagcacgggatctggtttcaggatttaccgctggcgattgagaaagtc
cgccaatatgggctgaaattggttggattacatatgcacattggttctggagtggattat
caacatcttgccaatgtatgtaacgctatggtggaacaagttatatcgtgcggtgaggac
attcaggccatttcagcaggaggcggattatcaattccttataaaacgggtgatgaaata
gtggatactgaacactattacagtctgtggcataaagctcgccagcgcattgaacggcac
ttggggcatcatgttgaactggaaattgagccaggccgttttctggtggctgaatcaggt
attttgatggctgaagtgagggcagtaaaaccaatgggtagccgtcattatgtgctggtg
gatgcgggtttcaacgatttgatgcgcccaacgatgtatggaagctatcatcatatttca
gttttatcggtgaatagccagcatattgatgaggctgtttcgcaggatgctgagttacat
gaaacgttagttgcagggccgttatgtgaatcaggtgatgtgtttactcaatcagcagga
ggcgatgttgtgccgcgtttgttgcctcgcgtttgtgtaggggattatttgattttccac
gatacaggcgcttatggtgcatctatgtcttcaaattacaatagtcgccctttgatcccc
gaaattttgtttattgagggtgacgcccgtttgattcgacgtaggcaaacaatagaagaa
ttgctggcattggaagcggtataa
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